突变谱、拷贝数变化与预后:新诊断骨髓瘤患者测序研究结果
Mutational Spectrum, Copy Number Changes, and Outcome: Results of a Sequencing Study of Patients With Newly Diagnosed Myeloma.
作者信息
Walker Brian A, Boyle Eileen M, Wardell Christopher P, Murison Alex, Begum Dil B, Dahir Nasrin M, Proszek Paula Z, Johnson David C, Kaiser Martin F, Melchor Lorenzo, Aronson Lauren I, Scales Matthew, Pawlyn Charlotte, Mirabella Fabio, Jones John R, Brioli Annamaria, Mikulasova Aneta, Cairns David A, Gregory Walter M, Quartilho Ana, Drayson Mark T, Russell Nigel, Cook Gordon, Jackson Graham H, Leleu Xavier, Davies Faith E, Morgan Gareth J
机构信息
Brian A. Walker, Eileen M. Boyle, Christopher P. Wardell, Alex Murison, Dil B. Begum, Nasrin M. Dahir, Paula Z. Proszek, David C. Johnson, Martin F. Kaiser, Lorenzo Melchor, Lauren I. Aronson, Charlotte Pawlyn, Fabio Mirabella, John R. Jones, Annamaria Brioli, Faith E. Davies, and Gareth J. Morgan, The Institute of Cancer Research, London; Matthew Scales, The Institute of Cancer Research, Surrey; David A. Cairns, Walter M. Gregory, and Ana Quartilho, University of Leeds; Gordon Cook, St James's University Hospital, Leeds; Mark T. Drayson, University of Birmingham, Birmingham; Nigel Russell, Nottingham University Hospital, Nottingham; Graham H. Jackson, Newcastle University, Newcastle upon Tyne, United Kingdom; Aneta Mikulasova, Masaryk University, Brno, Czech Republic; and Xavier Leleu, Hôpital C. Huriez, Centre Hospitalier Régional Universitaire de Lille, Lille, France.
出版信息
J Clin Oncol. 2015 Nov 20;33(33):3911-20. doi: 10.1200/JCO.2014.59.1503. Epub 2015 Aug 17.
PURPOSE
At the molecular level, myeloma is characterized by copy number abnormalities and recurrent translocations into the immunoglobulin heavy chain locus. Novel methods, such as massively parallel sequencing, have begun to describe the pattern of tumor-acquired mutations, but their clinical relevance has yet to be established.
METHODS
We performed whole-exome sequencing for 463 patients who presented with myeloma and were enrolled onto the National Cancer Research Institute Myeloma XI trial, for whom complete molecular cytogenetic and clinical outcome data were available.
RESULTS
We identified 15 significantly mutated genes: IRF4, KRAS, NRAS, MAX, HIST1H1E, RB1, EGR1, TP53, TRAF3, FAM46C, DIS3, BRAF, LTB, CYLD, and FGFR3. The mutational spectrum is dominated by mutations in the RAS (43%) and nuclear factor-κB (17%) pathways, but although they are prognostically neutral, they could be targeted therapeutically. Mutations in CCND1 and DNA repair pathway alterations (TP53, ATM, ATR, and ZNFHX4 mutations) are associated with a negative impact on survival. In contrast, those in IRF4 and EGR1 are associated with a favorable overall survival. We combined these novel mutation risk factors with the recurrent molecular adverse features and international staging system to generate an international staging system mutation score that can identify a high-risk population of patients who experience relapse and die prematurely.
CONCLUSION
We have refined our understanding of genetic events in myeloma and identified clinically relevant mutations that may be used to better stratify patients at presentation.
目的
在分子水平上,骨髓瘤的特征是拷贝数异常以及免疫球蛋白重链基因座的反复易位。诸如大规模平行测序等新方法已开始描述肿瘤获得性突变的模式,但其临床相关性尚未确立。
方法
我们对463例患有骨髓瘤并参加了英国国家癌症研究所骨髓瘤XI试验的患者进行了全外显子组测序,这些患者有完整的分子细胞遗传学和临床结局数据。
结果
我们鉴定出15个显著突变的基因:IRF4、KRAS、NRAS、MAX、HIST1H1E、RB1、EGR1、TP53、TRAF3、FAM46C、DIS3、BRAF、LTB、CYLD和FGFR3。突变谱以RAS(43%)和核因子κB(17%)信号通路的突变为主要特征,尽管它们对预后无影响,但可作为治疗靶点。CCND1突变和DNA修复通路改变(TP53、ATM、ATR和ZNFHX4突变)对生存有负面影响。相比之下,IRF4和EGR1突变与较好的总生存期相关。我们将这些新的突变风险因素与反复出现的分子不良特征和国际分期系统相结合,生成了一个国际分期系统突变评分,可识别出复发和过早死亡的高危患者群体。
结论
我们加深了对骨髓瘤遗传事件的理解,并确定了可能用于更好地在初诊时对患者进行分层的临床相关突变。
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