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通过常规诊断测序鉴定多发性骨髓瘤中的新型基因组发现。

Novel genomic findings in multiple myeloma identified through routine diagnostic sequencing.

机构信息

Department of Pathology, Peter MacCallum Cancer Centre, Melbourne, Victoria, Australia.

Department of Haematology, University College London Cancer Institute, London, UK.

出版信息

J Clin Pathol. 2018 Oct;71(10):895-899. doi: 10.1136/jclinpath-2018-205195. Epub 2018 May 14.

Abstract

AIMS

Multiple myeloma is a genomically complex haematological malignancy with many genomic alterations recognised as important in diagnosis, prognosis and therapeutic decision making. Here, we provide a summary of genomic findings identified through routine diagnostic next-generation sequencing at our centre.

METHODS

A cohort of 86 patients with multiple myeloma underwent diagnostic sequencing using a custom hybridisation-based panel targeting 104 genes. Sequence variants, genome-wide copy number changes and structural rearrangements were detected using an inhouse-developed bioinformatics pipeline.

RESULTS

At least one mutation was found in 69 (80%) patients. Frequently mutated genes included (36%), (22.1%), (15.1%), (8.1%) and (5.8%), including multiple mutations not previously described in myeloma. Importantly we observed mutations in the absence of a 17 p deletion in 8% of the cohort, highlighting the need for sequencing-based assessment in addition to cytogenetics to identify these high-risk patients. Multiple novel copy number changes and immunoglobulin heavy chain translocations are also discussed.

CONCLUSIONS

Our results demonstrate that many clinically relevant genomic findings remain in multiple myeloma which have not yet been identified through large-scale sequencing efforts, and provide important mechanistic insights into plasma cell pathobiology.

摘要

目的

多发性骨髓瘤是一种基因组复杂的血液恶性肿瘤,许多被认为对诊断、预后和治疗决策有重要意义的基因组改变已被识别。在此,我们总结了我们中心通过常规诊断下一代测序发现的基因组发现。

方法

86 例多发性骨髓瘤患者接受了靶向 104 个基因的定制杂交面板的诊断测序。使用内部开发的生物信息学管道检测序列变异、全基因组拷贝数变化和结构重排。

结果

至少在 69 例(80%)患者中发现了一个突变。经常发生突变的基因包括 (36%)、 (22.1%)、 (15.1%)、 (8.1%)和 (5.8%),包括以前在骨髓瘤中未描述的多个突变。重要的是,我们观察到在 8%的患者中存在 突变,而 17p 缺失缺失,这突出了除细胞遗传学外,还需要基于测序的评估来识别这些高危患者。还讨论了多个新的拷贝数变化和免疫球蛋白重链易位。

结论

我们的结果表明,许多具有临床意义的基因组发现仍存在于多发性骨髓瘤中,这些发现尚未通过大规模测序努力识别出来,并为浆细胞病理生物学提供了重要的机制见解。

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