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新种黏液膜状杆菌,从岩溶洞穴土壤样本中分离得到。

Hymenobacter mucosus sp. nov., isolated from a karst cave soil sample.

作者信息

Liu Lan, Zhou En-Min, Jiao Jian-Yu, Manikprabhu Deene, Ming Hong, Huang Mei-Juan, Yin Yi-Rui, Li Wen-Jun

机构信息

State Key Laboratory of Biocontrol and Guangdong Provincial Key Laboratory of Plant Resources, College of Ecology and Evolution, Sun Yat-Sen University, Guangzhou 510275, PR China.

Yunnan Institute of Microbiology, Yunnan University, Kunming 650091, PR China.

出版信息

Int J Syst Evol Microbiol. 2015 Nov;65(11):4121-4127. doi: 10.1099/ijsem.0.000550. Epub 2015 Aug 21.

Abstract

A novel Gram-stain-negative, non-motile, rod-shaped and watermelon-red-pigmented aerobic bacterial strain, designated YIM 77969T, was isolated from a soil sample of Jiuxiang cave, a tourism cave located in Yiliang county, Yunnan province, south-west China. Phylogenetic analysis based on the 16S rRNA gene sequence indicated that strain YIM 77969T belongs to the genus Hymenobacter, and was closely related to Hymenobacter tibetensis XTM003T (96.58 %), Hymenobacter gelipurpurascens Txg1T (96.02 %) and Hymenobacter xinjiangensis X2-1gT (95.80 %). Growth of strain YIM 77969T occurred at 5-35 °C, at pH 5.0-9.0 and in the presence of 0-1 % (w/v) NaCl. The predominant menaquinone was MK-7. The major fatty acids were iso-C15 : 0, C16 : 1ω5c and summed feature 3 (C16 : 1ω7c and/or C16 : 1ω6c). The polar lipid profiles consisted of the major compound phosphatidylethanolamine, two unknown aminolipids, three unknown aminophospholipids, one glycolipid and one unknown polar lipid. Pigment analysis showed that the pigment belonged to the plectaniaxanthin series of carotenoid pigments. The genomic DNA G+C content was 55.2 mol%. On the basis of phylogenetic, phenotypic and chemotaxonomic characteristics, strain YIM 77969T is considered to represent a novel species of the genus Hymenobacter, for which the name Hymenobacter mucosus sp. nov. is proposed. The type strain is YIM 77969T ( = KCTC 32567T = DSM 28041T).

摘要

从中国西南部云南省宜良县的一个旅游洞穴九乡洞中采集的土壤样本中,分离出了一株新型革兰氏阴性、无运动性、杆状且呈西瓜红色色素的需氧细菌菌株,命名为YIM 77969T。基于16S rRNA基因序列的系统发育分析表明,菌株YIM 77969T属于嗜皮菌属,与西藏嗜皮菌XTM003T(96.58%)、凝胶紫嗜皮菌Txg1T(96.02%)和新疆嗜皮菌X2-1gT(95.80%)密切相关。菌株YIM 77969T在5-35°C、pH 5.0-9.0以及0-1%(w/v)NaCl存在的条件下生长。主要的甲基萘醌是MK-7。主要脂肪酸为异-C15:0、C16:1ω5c以及总和特征3(C16:1ω7c和/或C16:1ω6c)。极性脂质谱由主要化合物磷脂酰乙醇胺、两种未知氨基脂质、三种未知氨基磷脂、一种糖脂和一种未知极性脂质组成。色素分析表明该色素属于胡萝卜素色素中的盘菌黄素系列。基因组DNA G+C含量为55.2mol%。基于系统发育、表型和化学分类学特征,菌株YIM 77969T被认为代表嗜皮菌属的一个新物种,为此提出新名称黏液嗜皮菌(Hymenobacter mucosus sp. nov.)。模式菌株为YIM 77969T(=KCTC 32567T=DSM 28041T)。

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