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探索组学时代微藻和细菌之间的互利相互作用。

Exploring mutualistic interactions between microalgae and bacteria in the omics age.

机构信息

Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge CB2 3EA, UK.

Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge CB2 3EA, UK.

出版信息

Curr Opin Plant Biol. 2015 Aug;26:147-53. doi: 10.1016/j.pbi.2015.07.003. Epub 2015 Aug 27.

Abstract

Microalgae undertake a wide range of mutualistic interactions with bacteria. Here we consider how transcriptomic, metagenomic and metabolomic approaches have been combined with microbiological and biochemical analyses to expand our understanding of algal-bacterial interactions. Identification of the major bacterial species associated with algae indicates that specific bacterial groups, particularly the alpha-Proteobacteria, are found more frequently, suggesting that these may have the means to initiate and maintain symbiotic relationships. Nutrient exchange is frequently the basis of algal-bacterial mutualism, and as the compounds involved are characterised, evidence is accumulating that these are complex and specific molecules, offering opportunities for signalling processes and regulation rather than merely passive diffusion. At the same time, it is clear that the interactions are not static, but can be initiated and broken in response to environmental and developmental cues.

摘要

微藻与细菌之间存在广泛的互利共生关系。在这里,我们考虑了如何将转录组学、宏基因组学和代谢组学方法与微生物学和生化分析相结合,以扩展我们对藻类-细菌相互作用的理解。鉴定与藻类相关的主要细菌物种表明,特定的细菌群体,特别是α变形菌,更为常见,这表明它们可能具有启动和维持共生关系的手段。营养物质的交换通常是藻类-细菌共生的基础,随着所涉及化合物的特征逐渐被阐明,有证据表明这些化合物是复杂和特异的分子,为信号传递过程和调控提供了机会,而不仅仅是被动扩散。与此同时,很明显,这些相互作用不是静态的,而是可以根据环境和发育线索启动和中断。

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