Kizina Jana, Žure Marina, Rhiel Erhard, Munn Colin Bernhard, Richter Michael, Harder Jens
Department of Microbiology, Max Planck Institute for Marine Microbiology, D-28359 Bremen, Germany.
Institute for Chemistry and Biology of the Marine Environment, Carl von Ossietzky University of Oldenburg, Oldenburg, Germany.
Mar Genomics. 2015 Dec;24 Pt 3:249-51. doi: 10.1016/j.margen.2015.07.011. Epub 2015 Aug 28.
The planctomycete strain K833 was isolated from cold waters at the coast of Island and is tentatively named 'Rhodopirellula islandica'. It has a lower temperature range for growth than other genome-sequenced Rhodopirellula strains affiliating to Rhodopirellula baltica and 'Rhodopirellula europaea'. The permanent draft genome of strain K833 was obtained as part of a larger study on the biogeography of Rhodopirellula species in European marine waters. The genome consists of 55 contigs with a genome size of 7,433,200 bp. With an average nucleotide identity of 81% to related genomes of R. baltica and 'R. europaea' and more than 4000 common genes, it will be a valuable source for the study of temperature adaptation of planctomycete genomes.
浮霉菌株K833是从该岛海岸的冷水中分离出来的，暂命名为“冰岛玫瑰单胞菌（Rhodopirellula islandica）”。与隶属于波罗的海玫瑰单胞菌（Rhodopirellula baltica）和“欧洲玫瑰单胞菌（Rhodopirellula europaea）”的其他已测序基因组的玫瑰单胞菌菌株相比，它的生长温度范围更低。作为对欧洲海水中玫瑰单胞菌物种生物地理学的一项更大规模研究的一部分，获得了菌株K833的永久草图基因组。该基因组由55个重叠群组成，基因组大小为7433200 bp。与波罗的海玫瑰单胞菌和“欧洲玫瑰单胞菌”的相关基因组平均核苷酸同一性为81%，且有4000多个共同基因，它将成为研究浮霉菌基因组温度适应性的宝贵资源。
