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结构灵活性在emerin进化中的作用。

Role of structural flexibility in the evolution of emerin.

作者信息

Yuan Jia, Xue Bin

机构信息

Department of Cell Biology, Microbiology and Molecular Biology, School of Natural Sciences and Mathematics, College of Arts and Sciences, University of South Florida, 4202 E. Fowler Ave, ISA 2015, Tampa, FL 33620, USA.

Department of Cell Biology, Microbiology and Molecular Biology, School of Natural Sciences and Mathematics, College of Arts and Sciences, University of South Florida, 4202 E. Fowler Ave, ISA 2015, Tampa, FL 33620, USA.

出版信息

J Theor Biol. 2015 Nov 21;385:102-11. doi: 10.1016/j.jtbi.2015.08.009. Epub 2015 Aug 28.

Abstract

Emerin is a short inner nuclear membrane protein with an LEM-domain at the N-terminal end and a transmembrane domain at the C-terminal end. The middle region of human emerin contains multiple binding motifs. Since emerin is often found in evolutionarily newer species, the functional conservation of emerin becomes an interesting topic. In this study, we have demonstrated that most of the functional motifs of emerin are intrinsically disordered or highly flexible. Many post-translational modification sites and mutation sites are associated with these disordered regions. The averaged substitution rates of most functional motifs between species correlate positively with the averaged disorder scores of those functional motifs. Human emerin sequence may have acquired new functions on protein-protein interaction through the formation of hydrophobic motifs in the middle region, which is resulted from accumulated mutations during the evolution process.

摘要

Emerin是一种短的内核膜蛋白,其N端有一个LEM结构域,C端有一个跨膜结构域。人Emerin的中间区域包含多个结合基序。由于Emerin常在进化上较新的物种中发现,Emerin的功能保守性成为一个有趣的话题。在本研究中,我们已经证明Emerin的大多数功能基序本质上是无序的或高度灵活的。许多翻译后修饰位点和突变位点与这些无序区域相关。物种间大多数功能基序的平均替换率与这些功能基序的平均无序分数呈正相关。人Emerin序列可能通过在中间区域形成疏水基序而在蛋白质-蛋白质相互作用上获得了新功能,这是进化过程中积累的突变导致的。

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