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肺腺癌组织中的差异N-糖基化模式

Differential N-Glycosylation Patterns in Lung Adenocarcinoma Tissue.

作者信息

Ruhaak L Renee, Taylor Sandra L, Stroble Carol, Nguyen Uyen Thao, Parker Evan A, Song Ting, Lebrilla Carlito B, Rom William N, Pass Harvey, Kim Kyoungmi, Kelly Karen, Miyamoto Suzanne

机构信息

Division of Hematology and Oncology, University of California Davis Comprehensive Cancer Center , Sacramento, California 95817, United States.

Division of Pulmonary and Critical Care Medicine, Department of Medicine, New York University School of Medicine , New York, New York 10016, United States.

出版信息

J Proteome Res. 2015 Nov 6;14(11):4538-49. doi: 10.1021/acs.jproteome.5b00255. Epub 2015 Sep 30.

Abstract

To decrease the mortality of lung cancer, better screening and diagnostic tools as well as treatment options are needed. Protein glycosylation is one of the major post-translational modifications that is altered in cancer, but it is not exactly clear which glycan structures are affected. A better understanding of the glycan structures that are differentially regulated in lung tumor tissue is highly desirable and will allow us to gain greater insight into the underlying biological mechanisms of aberrant glycosylation in lung cancer. Here, we assess differential glycosylation patterns of lung tumor tissue and nonmalignant tissue at the level of individual glycan structures using nLC-chip-TOF-MS. Using tissue samples from 42 lung adenocarcinoma patients, 29 differentially expressed (FDR < 0.05) glycan structures were identified. The levels of several oligomannose type glycans were upregulated in tumor tissue. Furthermore, levels of fully galactosylated glycans, some of which were of the hybrid type and mostly without fucose, were decreased in cancerous tissue, whereas levels of non- or low-galactosylated glycans mostly with fucose were increased. To further assess the regulation of the altered glycosylation, the glycomics data was compared to publicly available gene expression data from lung adenocarcinoma tissue compared to nonmalignant lung tissue. The results are consistent with the possibility that the observed N-glycan changes have their origin in differentially expressed glycosyltransferases. These results will be used as a starting point for the further development of clinical glycan applications in the fields of imaging, drug targeting, and biomarkers for lung cancer.

摘要

为降低肺癌死亡率,需要更好的筛查和诊断工具以及治疗方案。蛋白质糖基化是癌症中发生改变的主要翻译后修饰之一,但尚不清楚哪些聚糖结构受到影响。深入了解肺肿瘤组织中差异调节的聚糖结构非常必要,这将使我们能够更深入地洞察肺癌中异常糖基化的潜在生物学机制。在此,我们使用nLC-chip-TOF-MS在单个聚糖结构水平评估肺肿瘤组织和非恶性组织的差异糖基化模式。利用42例肺腺癌患者的组织样本,鉴定出29种差异表达(FDR<0.05)的聚糖结构。肿瘤组织中几种寡甘露糖型聚糖的水平上调。此外,完全半乳糖基化聚糖的水平在癌组织中降低,其中一些是杂合型且大多不含岩藻糖,而非半乳糖基化或低半乳糖基化且大多含岩藻糖的聚糖水平升高。为进一步评估糖基化改变的调控情况,将糖组学数据与来自肺腺癌组织与非恶性肺组织的公开可用基因表达数据进行比较。结果与观察到的N-聚糖变化源于差异表达的糖基转移酶的可能性一致。这些结果将作为肺癌成像、药物靶向和生物标志物等临床聚糖应用进一步发展的起点。

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