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通过下一代测序对胃增生性息肉中发生的胃型发育异常进行突变分析:胃增生性息肉中的突变

Mutational analysis by next generation sequencing of gastric type dysplasia occurring in hyperplastic polyps of the stomach: Mutations in gastric hyperplastic polyps.

作者信息

Salomao Marcela, Luna Aesis M, Sepulveda Jorge L, Sepulveda Antonia R

机构信息

Department of Pathology and Cell Biology, Columbia University Medical Center, New York, NY, United States.

Department of Pathology and Cell Biology, Columbia University Medical Center, New York, NY, United States.

出版信息

Exp Mol Pathol. 2015 Dec;99(3):468-73. doi: 10.1016/j.yexmp.2015.08.014. Epub 2015 Aug 29.

Abstract

UNLABELLED

Gastric hyperplastic polyps (GHP) are the most common type of polyps occurring in the stomach. Although GHP are broadly interpreted as benign lesions, they may progress to dysplasia and adenocarcinoma.

OBJECTIVE

In this study, we aimed to identify genomic mutations that characterize and may drive malignant transformation in GHP by using next-generation sequencing. Eight GHP (2 with dysplasia, 1 indefinite for dysplasia and 5 without dysplasia) were studied. Only large polyps (>1cm) with gastric differentiation were included in this study, while adenomatous polyps (intestinal-type) were excluded. Immunohistochemistry for MUC2, MUC5A, MUC6, CDX2, p53, and Ki67 was performed. DNA was extracted from formalin-fixed paraffin-embedded sections and sequenced for the detection of somatic mutations. Multiplex sequencing was done with the TrueSeq Amplicon Cancer Panel in the MiSeq platform. Variant annotation and visualization were performed using NextGENe (SoftGenetics) software. No pathogenic mutations were detected in GHP without dysplasia. TP53 gene mutations were the most common alteration in dysplastic GHP (2 of 2 dysplastic cases). PIK3CA mutation was identified in a GHP with pyloric-type dysplasia, whereas foveolar-type dysplasia carried TP53 mutations. In conclusion, TP53 gene mutations are a common alteration in the early dysplastic stage during malignant transformation of GHP. GHP with dysplasia may show dual differentiation. In our study, pyloric-type dysplasia was associated with a PIK3CA alteration whereas foveolar dysplasia carried TP53 mutations. The identification of carcinoma-associated mutations in large GHP provides additional evidence of their neoplastic potential and emphasizes the need for their complete resection and follow-up.

摘要

未标记

胃增生性息肉(GHP)是胃中最常见的息肉类型。尽管GHP被广泛认为是良性病变,但它们可能进展为发育异常和腺癌。

目的

在本研究中,我们旨在通过使用下一代测序来鉴定表征并可能驱动GHP恶性转化的基因组突变。研究了8个GHP(2个有发育异常,1个发育异常不明确,5个无发育异常)。本研究仅纳入具有胃分化的大息肉(>1cm),而腺瘤性息肉(肠型)被排除。进行了MUC2、MUC5A、MUC6、CDX2、p53和Ki67的免疫组织化学检测。从福尔马林固定石蜡包埋切片中提取DNA并进行测序以检测体细胞突变。在MiSeq平台上使用TrueSeq Amplicon Cancer Panel进行多重测序。使用NextGENe(SoftGenetics)软件进行变异注释和可视化。在无发育异常的GHP中未检测到致病突变。TP53基因突变是发育异常的GHP中最常见的改变(2例发育异常病例中有2例)。在一个具有幽门型发育异常的GHP中鉴定出PIK3CA突变,而小凹型发育异常携带TP53突变。总之,TP53基因突变是GHP恶性转化早期发育异常阶段的常见改变。有发育异常的GHP可能表现出双重分化。在我们的研究中,幽门型发育异常与PIK3CA改变相关,而小凹型发育异常携带TP53突变。在大的GHP中鉴定出与癌相关的突变提供了它们肿瘤形成潜力的额外证据,并强调了对其进行完整切除和随访的必要性。

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