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对别构调节受损的铜绿假单胞菌肌苷酸脱氢酶两种变体的晶体学研究。

Crystallographic studies of two variants of Pseudomonas aeruginosa IMPDH with impaired allosteric regulation.

作者信息

Labesse Gilles, Alexandre Thomas, Gelin Muriel, Haouz Ahmed, Munier-Lehmann Hélène

机构信息

CNRS, UMR5048, Université Montpellier 1 et 2, Centre de Biochimie Structurale, 34090 Montpellier, France.

Unité de Chimie et Biocatalyse, Institut Pasteur, 75015 Paris, France.

出版信息

Acta Crystallogr D Biol Crystallogr. 2015 Sep;71(Pt 9):1890-9. doi: 10.1107/S1399004715013115. Epub 2015 Aug 25.

Abstract

Inosine-5'-monophosphate dehydrogenases (IMPDHs), which are the rate-limiting enzymes in guanosine-nucleotide biosynthesis, are important therapeutic targets. Despite in-depth functional and structural characterizations of various IMPDHs, the role of the Bateman domain containing two CBS motifs remains controversial. Their involvement in the allosteric regulation of Pseudomonas aeruginosa IMPDH by Mg-ATP has recently been reported. To better understand the function of IMPDH and the importance of the CBS motifs, the structure of a variant devoid of these modules (ΔCBS) was solved at high resolution in the apo form and in complex with IMP. In addition, a single amino-acid substitution variant, D199N, was also structurally characterized: the mutation corresponds to the autosomal dominant mutant D226N of human IMPDH1, which is responsible for the onset of the retinopathy adRP10. These new structures shed light onto the possible mechanism of regulation of the IMPDH enzymatic activity. In particular, three conserved loops seem to be key players in this regulation as they connect the tetramer-tetramer interface with the active site and show significant modification upon substrate binding.

摘要

肌苷-5'-单磷酸脱氢酶(IMPDHs)是鸟苷酸生物合成中的限速酶,是重要的治疗靶点。尽管对各种IMPDHs进行了深入的功能和结构表征,但含有两个CBS基序的贝特曼结构域的作用仍存在争议。最近有报道称它们参与了镁-ATP对铜绿假单胞菌IMPDH的变构调节。为了更好地理解IMPDH的功能以及CBS基序的重要性,我们解析了一个缺失这些模块的变体(ΔCBS)在无配体形式以及与IMP复合物形式下的高分辨率结构。此外,还对一个单氨基酸替代变体D199N进行了结构表征:该突变对应于人类IMPDH1的常染色体显性突变体D226N,它是视网膜病变adRP10发病的原因。这些新结构揭示了IMPDH酶活性调节的可能机制。特别是,三个保守环似乎是这种调节的关键因素,因为它们将四聚体-四聚体界面与活性位点相连,并在底物结合时显示出显著变化。

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