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灰鹡鸰(雀形目:鹡鸰科)的完整线粒体基因组

The complete mitochondrial genome of Motacilla cinerea (Passeriformes: Motacillidae).

作者信息

Zhang Zhen, Qian Lifu, Wang Yupeng, Zhang Baowei

机构信息

a School of Resources and Environment, Anhui Agricultural University , Hefei , PR China .

b Hefei Scientific Observing and Experimental Station of Agro-Environment, Ministry of Agriculture , Hefei , PR China , and.

出版信息

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Sep;27(5):3680-1. doi: 10.3109/19401736.2015.1079853. Epub 2015 Sep 2.

Abstract

Motacilla cinerea is a species of small- and medium-sized songbird in the Family Motacillidae, which is widely distributed. In this study, we determined the complete mitochondrial genome of M. cinerea. The result showed that the total length of the mitogenome was 16 825 bp and contained two ribosomal RNA genes, 22 transfer RNA genes, 13 protein-coding genes, and one control region. All the genes in M. cinerea were distributed on the H-strand, except for the ND6 subunit gene and eight tRNA genes which are encoded on the L-strand. The phylogenetic tree was reconstructed using Bayesian analysis methods, and containing two clades: Motacilla and Anthus. The first lineage is Motacilla including M. cinerea and other nine species. The genus Anthus makes up the second group, which containing 17 species.

摘要

灰鹡鸰是鹡鸰科中小型鸣禽,分布广泛。在本研究中,我们测定了灰鹡鸰的完整线粒体基因组。结果表明,该线粒体基因组全长16825bp,包含两个核糖体RNA基因、22个转移RNA基因、13个蛋白质编码基因和一个控制区。灰鹡鸰的所有基因均分布于重链上,除了ND6亚基基因和8个在轻链上编码的tRNA基因。系统发育树采用贝叶斯分析方法重建,包含两个分支:鹡鸰属和鹨属。第一个谱系是鹡鸰属,包括灰鹡鸰和其他9个物种。鹨属构成第二组,包含17个物种。

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