Rosenberg Alex, Soufi Boumediene, Ravikumar Vaishnavi, Soares Nelson C, Krug Karsten, Smith Yoav, Macek Boris, Ben-Yehuda Sigal
Department of Microbiology and Molecular Genetics, Institute for Medical Research Israel-Canada (IMRIC), The Hebrew University-Hadassah Medical School, The Hebrew University of Jerusalem, POB 12272, 91120, Jerusalem, Israel.
Proteome Center Tuebingen, Interfaculty Institute for Cell Biology, University of Tuebingen, Auf der Morgenstelle 15, 72076, Tuebingen, Germany.
BMC Biol. 2015 Sep 17;13:76. doi: 10.1186/s12915-015-0184-7.
Bacterial spores can remain dormant for decades, yet harbor the exceptional capacity to rapidly resume metabolic activity and recommence life. Although germinants and their corresponding receptors have been known for more than 30 years, the molecular events underlying this remarkable cellular transition from dormancy to full metabolic activity are only partially defined.
Here, we examined whether protein phospho-modifications occur during germination, the first step of exiting dormancy, thereby facilitating spore revival. Utilizing Bacillus subtilis as a model organism, we performed phosphoproteomic analysis to define the Ser/Thr/Tyr phosphoproteome of a reviving spore. The phosphoproteome was found to chiefly comprise newly identified phosphorylation sites located within proteins involved in basic biological functions, such as transcription, translation, carbon metabolism, and spore-specific determinants. Quantitative comparison of dormant and germinating spore phosphoproteomes revealed phosphorylation dynamics, indicating that phospho-modifications could modulate protein activity during this cellular transition. Furthermore, by mutating select phosphorylation sites located within proteins representative of key biological processes, we established a functional connection between phosphorylation and the progression of spore revival.
Herein, we provide, for the first time, a phosphoproteomic view of a germinating bacterial spore. We further show that the spore phosphoproteome is dynamic and present evidence that phosphorylation events play an integral role in facilitating spore revival.
细菌孢子可以保持休眠状态数十年,但却拥有迅速恢复代谢活性并重新开始生命活动的非凡能力。尽管萌发剂及其相应受体已被知晓30多年,但这种从休眠到完全代谢活性的显著细胞转变背后的分子事件仅得到部分定义。
在此,我们研究了在萌发(即脱离休眠的第一步)过程中是否发生蛋白质磷酸化修饰,从而促进孢子复苏。利用枯草芽孢杆菌作为模式生物,我们进行了磷酸化蛋白质组分析以确定复苏孢子的丝氨酸/苏氨酸/酪氨酸磷酸化蛋白质组。发现该磷酸化蛋白质组主要由新鉴定的位于参与基本生物学功能(如转录、翻译、碳代谢和孢子特异性决定因素)的蛋白质内的磷酸化位点组成。休眠孢子和萌发孢子磷酸化蛋白质组的定量比较揭示了磷酸化动态变化,表明磷酸化修饰可以在这种细胞转变过程中调节蛋白质活性。此外,通过突变位于代表关键生物学过程的蛋白质内的特定磷酸化位点,我们建立了磷酸化与孢子复苏进程之间的功能联系。
在此,我们首次提供了萌发细菌孢子的磷酸化蛋白质组视图。我们进一步表明孢子磷酸化蛋白质组是动态的,并提供证据表明磷酸化事件在促进孢子复苏中起着不可或缺的作用。