Avdoshenko Stanislav M, Makarov Dmitrii E
Institute for Computational Engineering and Sciences and ‡Department of Chemistry, University of Texas at Austin , Austin, Texas 78712, United States.
J Phys Chem B. 2016 Mar 3;120(8):1537-45. doi: 10.1021/acs.jpcb.5b07613. Epub 2015 Oct 2.
The notions of a reaction path and a reaction coordinate are central to chemistry as they provide low-dimensional descriptions of complex molecular processes. Here we discuss how to define, compute, and use the reaction paths for chemical transformations in molecules that are subjected to mechanical stress and thus driven toward regions of conformational space that are otherwise inaccessible both in computational studies and in reality. We further show that the circuitous nature of mechanochemical pathways often makes their one-dimensional description impossible and describe how multidimensional effects can be detected experimentally.
反应路径和反应坐标的概念在化学中至关重要,因为它们为复杂的分子过程提供了低维描述。在这里,我们讨论如何定义、计算和使用分子中化学转化的反应路径,这些分子受到机械应力作用,从而被驱动到构象空间中在计算研究和实际中原本无法到达的区域。我们进一步表明,机械化学路径的迂回性质常常使其一维描述变得不可能,并描述了如何通过实验检测多维效应。