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鹦鹉博尔纳病毒5的基因组序列。

The genome sequence of parrot bornavirus 5.

作者信息

Guo Jianhua, Tizard Ian

机构信息

Department of Veterinary Pathobiology, Schubot Exotic Bird Health Center, Texas A&M University, College Station, TX, 77843, USA.

出版信息

Virus Genes. 2015 Dec;51(3):430-3. doi: 10.1007/s11262-015-1251-4. Epub 2015 Sep 24.

Abstract

Although several new avian bornaviruses have recently been described, information on their evolution, virulence, and sequence are often limited. Here we report the complete genome sequence of parrot bornavirus 5 (PaBV-5) isolated from a case of proventricular dilatation disease in a Palm cockatoo (Probosciger aterrimus). The complete genome consists of 8842 nucleotides with distinct 5' and 3' end sequences. This virus shares nucleotide sequence identities of 69-74 % with other bornaviruses in the genomic regions excluding the 5' and 3' terminal sequences. Phylogenetic analysis based on the genomic regions demonstrated this new isolate is an isolated branch within the clade that includes the aquatic bird bornaviruses and the passerine bornaviruses. Based on phylogenetic analyses and its low nucleotide sequence identities with other bornavirus, we support the proposal that PaBV-5 be assigned to a new bornavirus species:- Psittaciform 2 bornavirus.

摘要

尽管最近已描述了几种新的禽博尔纳病毒,但关于它们的进化、毒力和序列的信息往往有限。在此,我们报告了从一只棕榈凤头鹦鹉(Probosciger aterrimus)的一例腺胃扩张病病例中分离出的鹦鹉博尔纳病毒5(PaBV-5)的完整基因组序列。完整基因组由8842个核苷酸组成,具有独特的5'和3'末端序列。该病毒在不包括5'和3'末端序列的基因组区域与其他博尔纳病毒的核苷酸序列同一性为69-74%。基于基因组区域的系统发育分析表明,这种新分离株是包括水鸟博尔纳病毒和雀形目博尔纳病毒在内的进化枝中的一个独立分支。基于系统发育分析及其与其他博尔纳病毒的低核苷酸序列同一性,我们支持将PaBV-5归为一种新的博尔纳病毒物种的提议:鹦鹉形2博尔纳病毒。

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