Tan Tzer Han, Silverberg Jesse L, Floss Daniela S, Harrison Maria J, Henley Christopher L, Cohen Itai
Department of Applied and Engineering Physics, Cornell University, Ithaca, NY 14853;
Department of Physics, Cornell University, Ithaca, NY 14853;
Proc Natl Acad Sci U S A. 2015 Oct 20;112(42):12938-43. doi: 10.1073/pnas.1509942112. Epub 2015 Oct 2.
Experimental studies show that plant root morphologies can vary widely from straight gravity-aligned primary roots to fractal-like root architectures. However, the opaqueness of soil makes it difficult to observe how environmental factors modulate these patterns. Here, we combine a transparent hydrogel growth medium with a custom built 3D laser scanner to directly image the morphology of Medicago truncatula primary roots. In our experiments, root growth is obstructed by an inclined plane in the growth medium. As the tilt of this rigid barrier is varied, we find Medicago transitions between randomly directed root coiling, sinusoidal root waving, and normal gravity-aligned morphologies. Although these root phenotypes appear morphologically distinct, our analysis demonstrates the divisions are less well defined, and instead, can be viewed as a 2D biased random walk that seeks the path of steepest decent along the inclined plane. Features of this growth response are remarkably similar to the widely known run-and-tumble chemotactic behavior of Escherichia coli bacteria, where biased random walks are used as optimal strategies for nutrient uptake.
实验研究表明,植物根系形态差异很大,从垂直于重力方向的直根系到类似分形的根系结构。然而,土壤的不透明性使得观察环境因素如何调节这些模式变得困难。在这里,我们将透明水凝胶生长培养基与定制的三维激光扫描仪相结合,直接成像截形苜蓿主根的形态。在我们的实验中,根系生长受到生长培养基中倾斜平面的阻碍。随着这个刚性障碍物倾斜度的变化,我们发现截形苜蓿在随机定向的根系盘绕、正弦状根系波动和正常重力对齐形态之间转变。尽管这些根系表型在形态上看起来不同,但我们的分析表明,这些划分并不那么明确,相反,可以看作是二维有偏随机游走,沿着倾斜平面寻找最陡峭的下降路径。这种生长反应的特征与广为人知的大肠杆菌的趋化行为非常相似,在趋化行为中,有偏随机游走被用作获取营养的最优策略。