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GC偏向性基因转换将重组图谱和种群统计学与基因组碱基组成联系起来:GC偏向性基因转换驱动了广泛物种的基因组碱基组成。

GC-biased gene conversion links the recombination landscape and demography to genomic base composition: GC-biased gene conversion drives genomic base composition across a wide range of species.

作者信息

Mugal Carina F, Weber Claudia C, Ellegren Hans

机构信息

Department of Evolutionary Biology, Evolutionary Biology Centre, Uppsala University, Uppsala, Sweden.

Department of Biology, Center for Computational Genetics and Genomics, Temple University, Philadelphia, PA, USA.

出版信息

Bioessays. 2015 Dec;37(12):1317-26. doi: 10.1002/bies.201500058. Epub 2015 Oct 7.

Abstract

The origin and evolutionary dynamics of the spatial heterogeneity in genomic base composition have been debated since its discovery in the 1970s. With the recent availability of numerous genome sequences from a wide range of species it has been possible to address this question from a comparative perspective, and similarities and differences in base composition between groups of organisms are becoming evident. Ample evidence suggests that the contrasting dynamics of base composition are driven by GC-biased gene conversion (gBGC), a process that is associated with meiotic recombination. In line with this hypothesis, base composition is associated with the rate of recombination and the evolutionary dynamics of the recombination landscape, therefore, governs base composition. In addition, and at first sight perhaps surprisingly, the relationship between demography and genomic base composition is in agreement with the gBGC hypothesis: organisms with larger populations have higher GC content than those with smaller populations.

摘要

自20世纪70年代基因组碱基组成的空间异质性被发现以来,其起源和进化动力学一直存在争议。随着近期从广泛物种中获得了大量基因组序列,从比较的角度解决这个问题成为可能,不同生物群体之间碱基组成的异同也日益明显。大量证据表明,碱基组成的对比动态是由GC偏向性基因转换(gBGC)驱动的,这一过程与减数分裂重组相关。与该假设一致,碱基组成与重组率相关,而重组景观的进化动力学决定了碱基组成。此外,乍一看可能令人惊讶的是,种群统计学与基因组碱基组成之间的关系与gBGC假设相符:种群较大的生物比种群较小的生物具有更高的GC含量。

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