Kirkham Justin K, Park Sung Hee, Nguyen Tu N, Lee Ju Huck, Günzl Arthur
Department of Genetics and Genome Sciences, University of Connecticut Health Center, Farmington, Connecticut, USA.
Department of Genetics and Genome Sciences, University of Connecticut Health Center, Farmington, Connecticut, USA
Mol Cell Biol. 2015 Oct 12;36(1):95-107. doi: 10.1128/MCB.00705-15. Print 2016 Jan 1.
Dynein light chain LC8 is highly conserved among eukaryotes and has both dynein-dependent and dynein-independent functions. Interestingly, LC8 was identified as a subunit of the class I transcription factor A (CITFA), which is essential for transcription by RNA polymerase I (Pol I) in the parasite Trypanosoma brucei. Given that LC8 has never been identified with a basal transcription factor and that T. brucei relies on RNA Pol I for expressing the variant surface glycoprotein (VSG), the key protein in antigenic variation, we investigated the CITFA-specific role of LC8. Depletion of LC8 from mammalian-infective bloodstream trypanosomes affected cell cycle progression, reduced the abundances of rRNA and VSG mRNA, and resulted in rapid cell death. Sedimentation analysis, coimmunoprecipitation of recombinant proteins, and bioinformatic analysis revealed an LC8 binding site near the N terminus of the subunit CITFA2. Mutation of this site prevented the formation of a CITFA2-LC8 heterotetramer and, in vivo, was lethal, affecting assembly of a functional CITFA complex. Gel shift assays and UV cross-linking experiments identified CITFA2 as a promoter-binding CITFA subunit. Accordingly, silencing of LC8 or CITFA2 resulted in a loss of CITFA from RNA Pol I promoters. Hence, we discovered an LC8 interaction that, unprecedentedly, has a basal function in transcription.
动力蛋白轻链LC8在真核生物中高度保守,具有依赖动力蛋白和不依赖动力蛋白的功能。有趣的是,LC8被鉴定为I类转录因子A(CITFA)的一个亚基,而CITFA对于寄生虫布氏锥虫中RNA聚合酶I(Pol I)的转录至关重要。鉴于LC8从未被鉴定为基础转录因子,且布氏锥虫依赖RNA Pol I来表达可变表面糖蛋白(VSG),即抗原变异中的关键蛋白,我们研究了LC8在CITFA中的特定作用。从感染哺乳动物的血流型锥虫中去除LC8会影响细胞周期进程,降低rRNA和VSG mRNA的丰度,并导致细胞迅速死亡。沉降分析、重组蛋白的免疫共沉淀和生物信息学分析揭示了在CITFA2亚基N端附近有一个LC8结合位点。该位点的突变阻止了CITFA2-LC8异源四聚体的形成,并且在体内是致死的,影响了功能性CITFA复合物的组装。凝胶迁移实验和紫外线交联实验确定CITFA2是一个与启动子结合的CITFA亚基。因此,沉默LC8或CITFA2会导致RNA Pol I启动子上的CITFA缺失。因此,我们发现了一种LC8相互作用,其在转录中具有前所未有的基础功能。