Li Chun L, Ashworth Matt P, Witkowski Andrzej, Dąbek Przemysław, Medlin Linda K, Kooistra Wiebe H C F, Sato Shinya, Zgłobicka Izabela, Kurzydłowski Krzysztof J, Theriot Edward C, Sabir Jamal S M, Khiyami Mohammad A, Mutwakil Mohammed H Z, Sabir Meshaal J, Alharbi Njud S, Hajarah Nahid H, Qing Song, Jansen Robert K
Palaeoceanology Unit, Faculty of Geosciences, University of Szczecin, Mickiewicza 18, PL-70-383, Szczecin, Poland.
Department of Integrative Biology, University of Texas at Austin, Austin, Texas, United States of America.
PLoS One. 2015 Oct 14;10(10):e0139300. doi: 10.1371/journal.pone.0139300. eCollection 2015.
Plagiogrammaceae, a poorly described family of diatoms, are common inhabitants of the shallow marine littoral zone, occurring either in the sediments or as epiphytes. Previous molecular phylogenies of the Plagiogrammaceae were inferred but included only up to six genera: Plagiogramma, Dimeregramma, Neofragilaria, Talaroneis, Psammogramma and Psammoneis. In this paper, we describe a new plagiogrammoid genus, Orizaformis, obtained from Bohai Sea (China) and present molecular phylogenies of the family based on three and four genes (nuclear-encoded large and small subunit ribosomal RNAs and chloroplast-encoded rbcL and psbC). Also included in the new phylogenies is Glyphodesmis. The phylogenies suggest that the Plagiogrammaceae is composed of two major clades: one consisting of Talaroneis, Orizaformis and Psammoneis, and the second of Glyphodesmis, Psammogramma, Neofragilaria, Dimeregramma and Plagiogramma. In addition, we describe three new species within established genera: Psammoneis obaidii, which was collected from the Red Sea, Saudi Arabia; and Neofragilaria stilus and Talaroneis biacutifrons from the Mozambique Channel, Indian Ocean, and illustrate two new combination taxa: Neofragilaria anomala and Neofragilaria lineata. Our observations suggest that the biodiversity of the family is strongly needed to be researched, and the phylogenetic analyses provide a useful framework for future studies of Plagiogrammaceae.
斜纹藻科是一个描述较少的硅藻科,是浅海沿岸带的常见生物,存在于沉积物中或附生在其他生物上。此前已对斜纹藻科进行了分子系统发育推断,但仅包含多达六个属:斜纹藻属、双纹藻属、新脆杆藻属、角毛藻属、沙斜纹藻属和沙纹藻属。在本文中,我们描述了一个从中国渤海获得的新斜纹藻样属——稻形藻属,并基于三个和四个基因(核编码的大亚基和小亚基核糖体RNA以及叶绿体编码的rbcL和psbC)展示了该科的分子系统发育。新的系统发育中还包括刻纹藻属。系统发育表明,斜纹藻科由两个主要分支组成:一个分支由角毛藻属、稻形藻属和沙纹藻属组成,另一个分支由刻纹藻属、沙斜纹藻属、新脆杆藻属、双纹藻属和斜纹藻属组成。此外,我们描述了三个已确立属内的新物种:从沙特阿拉伯红海采集的奥贝德沙纹藻;从印度洋莫桑比克海峡采集的新脆杆藻和双尖角毛藻,并阐述了两个新的组合分类群:异常新脆杆藻和线形新脆杆藻。我们的观察表明,该科的生物多样性亟待研究,系统发育分析为未来斜纹藻科的研究提供了一个有用的框架。