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[通过逆转录环介导等温扩增检测中东呼吸综合征冠状病毒]

[Detection of Middle East Respiratory Syndrome Coronavirus by Reverse-transcription Loop-Mediated Isothermal Amplification].

作者信息

Li Guan, Nie Kai, Zhang Dan, Li Xinna, Wang Yanqun, Tan Wenjie, Ma Xuejun

出版信息

Bing Du Xue Bao. 2015 May;31(3):269-75.

PMID:26470533
Abstract

A simple, rapid and sensitive colorimetric reverse-transcription loop-mediated isothermal amplification (RT-LAMP) was developed for rapid detection of Middle East respiratory syndrome coronavirus (MERS-CoV). The method employed six primers that recognized sequences of a nucleocapsid gene for amplification of nucleic acids under isothermal conditions at 63 degrees C for 60 min. Products were detected through a LA-320c Loopamp Turbidimeter (real-time RT-LAMP) or visual inspection of color change by pre-addition of Hydroxynaphthol Blue dye (visual RT-LAMP). Specificity of RT-LAMP was validated by detection of several human coronaviruses and common respiratory viruses. MERS-CoV real-time RT-LAMP had a linear correlation (R2) of 0.995 at 10(3)-10(6) copies. The limit of detection of real-time RT-LAMP, visual RT-LAMP and quantitative real-time PCR was 500, 1000 and 100 copies/reaction, respectively. The established RT-LAMP assay was demonstrated to be a rapid screening tool for MERS-CoV infection, and could be suitable in resource-limited clinical sites and for field studies.

摘要

为快速检测中东呼吸综合征冠状病毒(MERS-CoV),开发了一种简单、快速且灵敏的比色逆转录环介导等温扩增(RT-LAMP)方法。该方法使用六条引物识别核衣壳基因序列,在63℃等温条件下扩增核酸60分钟。产物通过LA-320c环介导等温扩增浊度仪(实时RT-LAMP)检测,或通过预先添加羟基萘酚蓝染料进行颜色变化的目视检查(目视RT-LAMP)。通过检测几种人类冠状病毒和常见呼吸道病毒验证了RT-LAMP的特异性。MERS-CoV实时RT-LAMP在10³-10⁶拷贝数时线性相关系数(R²)为0.995。实时RT-LAMP、目视RT-LAMP和定量实时PCR的检测限分别为500、1000和100拷贝/反应。所建立的RT-LAMP检测方法被证明是一种用于MERS-CoV感染的快速筛查工具,适用于资源有限的临床场所和现场研究。

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Rev Med Virol. 2020 May;30(3):e2106. doi: 10.1002/rmv.2106. Epub 2020 Apr 17.
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J Appl Microbiol. 2018 Mar;124(3):626-643. doi: 10.1111/jam.13647. Epub 2018 Feb 12.