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单次紫外线辐射暴露加速形成的小鼠黑色素瘤带有光产物印记,但关键基因中缺乏紫外线特征性的C>T突变。

Murine melanomas accelerated by a single UVR exposure carry photoproduct footprints but lack UV signature C>T mutations in critical genes.

作者信息

Mukhopadhyay P, Ferguson B, Muller H K, Handoko H Y, Walker G J

机构信息

QIMR Berghofer Medical Research Institute, Herston, Queensland, Australia.

School of Medicine, University of Tasmania, Hobart, Tasmania, Australia.

出版信息

Oncogene. 2016 Jun 23;35(25):3342-50. doi: 10.1038/onc.2015.386. Epub 2015 Oct 19.

Abstract

Ultraviolet radiation (UVR) exposure increases malignant melanoma (MM) risk, but in the context of acute, not cumulative exposure. C>T and CC>TT changes make up the overwhelming majority of single base substitutions (SBS) in MM DNA, as both precursor melanocytes and melanocytic lesions have incurred incidental exposures to sunlight. To study the mutagenic mechanisms by which acute sunburn accelerates MM, we sequenced the exomes of spontaneous and neonatal UVB-induced Cdk4-R24C::Tyr-NRASQ61K mouse MMs. UVR-induced MMs carried more SBSs than spontaneous MMs, but the levels of genomic instability, reflected by translocations and copy number changes, were not different. C>T/G>A was the most common SBS in spontaneous and UVR-induced MMs, only modestly increased in the latter. However, they tended to occur at the motif A/GpCpG (reflecting C>T transition due to spontaneous deamination of cytosine at CpG) in spontaneous MMs, and T/CpCpC/T (reflecting the effects of pyrimidine dimers on either side of the mutated C) in UVR-induced MMs. Unlike MMs associated with repetitive exposures, we observed no CC>TT changes. In addition, we also found UVR 'footprints' at T>A/A>Ts (at NpTpT) and T>C/A>G (at CpTpC). These footprints are also present in MMs from a chronic UVR mouse model, and in some human MMs, suggesting that they may be minor UVR signature changes. We found few significantly somatically mutated genes (~6 per spontaneous and 15 per UVR-induced melanoma) in addition to the Cdk4 and NRAS mutations already present. Trp53 was the most convincing recurrently mutated gene; however, in the UVR-induced MMs no Trp53 mutations were at C>T/G>A, suggesting that it was probably mutated during tumour progression, not directly induced by UVR photoproducts. The very low load of recurrent mutations convincingly induced by classical UVB-induced dimer photoproducts may support a role for cell extrinsic mechanisms, such as photoimmunosuppression and inflammation in driving MM after acute UVB exposure.

摘要

紫外线辐射(UVR)暴露会增加恶性黑色素瘤(MM)的风险,但这种风险增加是在急性暴露而非累积暴露的情况下。C>T和CC>TT变化构成了MM DNA中绝大多数的单碱基替换(SBS),因为前体黑素细胞和黑素细胞病变都曾偶然暴露于阳光。为了研究急性晒伤加速MM的诱变机制,我们对自发的和新生小鼠经紫外线B(UVB)诱导产生的Cdk4-R24C::Tyr-NRASQ61K小鼠MM进行了外显子组测序。UVR诱导产生的MM比自发产生的MM携带更多的SBS,但由易位和拷贝数变化所反映的基因组不稳定水平并无差异。C>T/G>A是自发的和UVR诱导产生的MM中最常见的SBS,在后者中仅适度增加。然而,它们倾向于出现在自发MM中的基序A/GpCpG处(反映由于CpG处胞嘧啶自发脱氨导致的C>T转换),以及UVR诱导产生的MM中的T/CpCpC/T处(反映突变C两侧嘧啶二聚体的影响)。与与重复性暴露相关的MM不同,我们未观察到CC>TT变化。此外,我们还在T>A/A>T(在NpTpT处)和T>C/A>G(在CpTpC处)发现了UVR“足迹”。这些足迹也存在于慢性UVR小鼠模型的MM以及一些人类MM中,表明它们可能是轻微的UVR特征变化。除了已存在的Cdk4和NRAS突变外,我们发现很少有显著的体细胞突变基因(自发产生的MM约每例6个,UVR诱导产生的黑素瘤约每例15个)。Trp53是最有说服力的反复突变基因;然而,在UVR诱导产生的MM中,没有Trp53突变发生在C>T/G>A处,这表明它可能是在肿瘤进展过程中发生突变的,而非直接由UVR光产物诱导。经典UVB诱导的二聚体光产物令人信服地诱导产生的反复突变的负荷非常低,这可能支持细胞外机制,如光免疫抑制和炎症在急性UVB暴露后驱动MM发生中的作用。

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