Beheshtian Maryam, Saee Rad Samira, Babanejad Mojgan, Mohseni Marzieh, Hashemi Hassan, Eshghabadi Arash, Hajizadeh Fedra, Akbari Mohammad Reza, Kahrizi Kimia, Riazi Esfahani Mohammad, Najmabadi Hossein
Genetics Research Center, University of Social Welfare and Rehabilitation Sciences, Tehran, Iran.
Dietary Supplements and Probiotic Research Center, Alborz University of Medical Sciences, Karaj, Iran, Noor Ophthalmology Research Center, Noor Eye Hospital, Tehran, Iran.
Arch Iran Med. 2015 Nov;18(11):776-85.
Non-syndromic autosomal recessive Retinitis Pigmentosa (arRP) is a highly heterogeneous genetic visual disorder with a large number of causative genes. We aimed to determine the power of Whole Exome Sequencing (WES) in the identification of the genes responsible for non-syndromic arRP among Iranian patients.
We used WES, followed by the Sanger sequencing to identify the underlying gene mutations causing non-syndromic arRP.
Our study revealed disease-causing mutations in known arRP genes for 10 of the 13 families studied (76.9%). These mutations included two-frameshift insertion/deletion in CRB1 and ABCA4, one splicing mutation in PDE6B, four missense mutations in RP1, CRB1, PANK2 and IFT140, as well as three stop codon mutations in RDH12, PRCD, and C2orf71. Three remaining families harbored no mutation in previously known RP genes. Of the 10 diseases causing mutations identified among the investigated Iranian patients with non-syndromic arRP, eight variants had not been reported previously. We confirmed segregation of all 10 mutations with disease phenotypes in our studied population.
This study supports the genetic heterogeneity of non-syndromic arRP in Iranian patients, and provides an opportunity to show the effectiveness of WES in the identification of pathogenic mutations among patients with non-syndromic arRP born to consanguineous parents.
非综合征性常染色体隐性视网膜色素变性(arRP)是一种高度异质性的遗传性视觉障碍,有大量致病基因。我们旨在确定全外显子测序(WES)在识别伊朗患者中非综合征性arRP致病基因方面的效能。
我们采用WES,随后进行桑格测序以识别导致非综合征性arRP的潜在基因突变。
我们的研究在13个研究家族中的10个(76.9%)发现了已知arRP基因中的致病突变。这些突变包括CRB1和ABCA4中的两个移码插入/缺失、PDE6B中的一个剪接突变、RP1、CRB1、PANK2和IFT140中的四个错义突变,以及RDH12、PRCD和C2orf71中的三个终止密码子突变。其余三个家族在先前已知的RP基因中未发现突变。在接受调查的伊朗非综合征性arRP患者中鉴定出的10个致病突变中,有8个变异此前未被报道。我们在研究人群中证实了所有10个突变与疾病表型的共分离。
本研究支持伊朗患者中非综合征性arRP的遗传异质性,并提供了一个机会来展示WES在识别近亲结婚生育的非综合征性arRP患者致病突变方面的有效性。