铜绿假单胞菌ATCC 9027（DSM 1128）的基因组序列草图，该菌是一种重要的鼠李糖脂表面活性剂生产菌和无菌检测菌株。
Draft Genome Sequence of Pseudomonas aeruginosa ATCC 9027 (DSM 1128), an Important Rhamnolipid Surfactant Producer and Sterility Testing Strain.
作者信息
Mai-Prochnow Anne, Bradbury Mark, Murphy Anthony B
机构信息
CSIRO Manufacturing, Lindfield, New South Wales, Australia
CSIRO Food and Nutrition, North Ryde, New South Wales, Australia.
出版信息
Genome Announc. 2015 Oct 29;3(5):e01259-15. doi: 10.1128/genomeA.01259-15.
Abstract
Pseudomonas aeruginosa ATCC 9027 (DSM1128) is often used as a quality-control strain for sterility and microbial contamination testing and is an important biosurfactant producer. Here, we present the 6.4-Mb draft genome sequence and highlight some genomic differences to its closest relative, P. aeruginosa strain PA7.
摘要
铜绿假单胞菌ATCC 9027（DSM1128）常被用作无菌和微生物污染检测的质量控制菌株，也是一种重要的生物表面活性剂产生菌。在此，我们展示了其6.4兆碱基的基因组草图序列，并强调了它与其最相近的亲缘菌株——铜绿假单胞菌PA7菌株之间的一些基因组差异。
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本文引用的文献
1
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PLoS One. 2015 Jun 26;10(6):e0130373. doi: 10.1371/journal.pone.0130373. eCollection 2015.
2
A5-miseq: an updated pipeline to assemble microbial genomes from Illumina MiSeq data.A5-miseq：一种用于从Illumina MiSeq数据组装微生物基因组的更新流程。
Bioinformatics. 2015 Feb 15;31(4):587-9. doi: 10.1093/bioinformatics/btu661. Epub 2014 Oct 22.
3
Complete genome sequence of the multiresistant taxonomic outlier Pseudomonas aeruginosa PA7.多药耐药分类异常假单胞菌 PA7 的完整基因组序列。
PLoS One. 2010 Jan 22;5(1):e8842. doi: 10.1371/journal.pone.0008842.
4
Sequence diversity of Pseudomonas aeruginosa: impact on population structure and genome evolution.铜绿假单胞菌的序列多样性：对种群结构和基因组进化的影响
J Bacteriol. 2000 Jun;182(11):3125-35. doi: 10.1128/JB.182.11.3125-3135.2000.
5
Structural and functional implications of sequence diversity of Pseudomonas aeruginosa genes oriC, ampC and fliC.铜绿假单胞菌基因oriC、ampC和fliC序列多样性的结构和功能影响
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Mol Microbiol. 1993 Aug;9(3):497-506. doi: 10.1111/j.1365-2958.1993.tb01711.x.
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