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在高级重组近交BXD小鼠中对调控大肠杆菌O157:H7 TUV86-2差异定殖的基因座进行定位。

Mapping of genetic loci that modulate differential colonization by Escherichia coli O157:H7 TUV86-2 in advanced recombinant inbred BXD mice.

作者信息

Russo Lisa M, Abdeltawab Nourtan F, O'Brien Alison D, Kotb Malak, Melton-Celsa Angela R

机构信息

Department of Microbiology and Immunology, Uniformed Services University of the Health Sciences, Bethesda, MD, USA.

University of Cincinnati College of Medicine & Cincinnati VA Medical Center, Cincinnati, OH, USA.

出版信息

BMC Genomics. 2015 Nov 16;16:947. doi: 10.1186/s12864-015-2127-7.

Abstract

BACKGROUND

Shiga toxin (Stx)-producing E. coli (STEC) are responsible for foodborne outbreaks that can result in severe human disease. During an outbreak, differential disease outcomes are observed after infection with the same STEC strain. One question of particular interest is why some infected people resolve infection after hemorrhagic colitis whereas others progress to the hemolytic uremic syndrome (HUS). Host age and infection dose have been implicated; however, these parameters do not appear to fully account for all of the observed variation in disease severity. Therefore, we hypothesized that additional host genetic factors may play a role in progression to HUS.

METHODS AND RESULTS

To mimic the genetic diversity in the human response to infection by STEC, we measured the capacity of an O157:H7 outbreak isolate to colonize mouse strains from the advanced recombinant inbred (ARI) BXD panel. We first infected the BXD parental strains C57BL/6 J (B6) and DBA/2 J (D2) with either 86-24 (Stx2a+) or TUV86-2, an Stx2a-negative isogenic mutant. Colonization levels were determined in an intact commensal flora (ICF) infection model. We found a significant difference in colonization levels between the parental B6 and D2 strains after infection with TUV86-2 but not with 86-24. This observation suggested that a host factor that may be masked by Stx2a affects O157:H7 colonization in some genetic backgrounds. We then determined the TUV86-2 colonization levels of 24 BXD strains in the ICF model. We identified several quantitative trait loci (QTL) associated with variation in colonization by correlation analyses. We found a highly significant QTL on proximal chromosome 9 (12.5-26.7 Mb) that strongly predicts variation in colonization levels and accounts for 15-20 % of variance. Linkage, polymorphism and co-citation analyses of the mapped region revealed 36 candidate genes within the QTL, and we identified five genes that are most likely responsible for the differential colonization.

CONCLUSIONS

The identification of the QTL on chromosome 9 supports our hypothesis that individual genetic makeup affects the level of colonization after infection with STEC O157:H7.

摘要

背景

产志贺毒素大肠杆菌(STEC)可引发食源性疾病暴发,导致严重的人类疾病。在一次暴发期间,感染同一STEC菌株后会观察到不同的疾病转归。一个特别令人感兴趣的问题是,为什么一些感染者在患出血性结肠炎后感染得以痊愈,而另一些人却进展为溶血尿毒综合征(HUS)。宿主年龄和感染剂量被认为与之有关;然而,这些参数似乎并不能完全解释所观察到的疾病严重程度的所有差异。因此,我们推测可能还有其他宿主遗传因素在进展为HUS的过程中发挥作用。

方法与结果

为模拟人类对STEC感染反应中的遗传多样性,我们检测了一株O157:H7暴发分离株在来自高级重组近交(ARI)BXD品系的小鼠品系中定殖的能力。我们首先用86 - 24(产Stx2a)或TUV86 - 2(Stx2a阴性同基因突变体)感染BXD亲本菌株C57BL/6 J(B6)和DBA/2 J(D2)。在完整共生菌群(ICF)感染模型中测定定殖水平。我们发现用TUV感染后,亲本B6和D2菌株的定殖水平存在显著差异,但用86 - 24感染后无差异。这一观察结果表明,一个可能被Stx2a掩盖的宿主因子在某些遗传背景下会影响O157:H7的定殖。然后我们在ICF模型中测定了24个BXD菌株的TUV86 - 2定殖水平。通过相关性分析,我们鉴定出了几个与定殖差异相关的数量性状基因座(QTL)。我们在近端9号染色体(12.5 - 26.7 Mb)上发现了一个高度显著的QTL,它能强烈预测定殖水平的差异,并解释15 - 20%的变异。对定位区域的连锁、多态性和共引用分析揭示了该QTL内有36个候选基因,我们确定了最有可能导致定殖差异的5个基因。

结论

9号染色体上QTL的鉴定支持了我们的假设,即个体遗传构成会影响感染STEC O157:H7后的定殖水平。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6df/4647490/95fa5039bb79/12864_2015_2127_Fig1_HTML.jpg

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