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[利用16S rRNA基因分析方法对雾霾污染事件期间北京PM2.5和PM1样本中的空气传播细菌群落进行特征分析]

[Characterizing Beijing's Airborne Bacterial Communities in PM2.5 and PM1 Samples During Haze Pollution Episodes Using 16S rRNA Gene Analysis Method].

作者信息

Wang Bu-ying, Lang Ji-dong, Zhang Li-na, Fang Jian-huo, Cao Chen, Hao Ji-ming, Zhu Ting, Tian Geng, Jiang Jing-kun

出版信息

Huan Jing Ke Xue. 2015 Aug;36(8):2727-34.

Abstract

During 8th-14th Jan., 2013, severe particulate matter (PM) pollution episodes happened in Beijing. These air pollution events lead to high risks for public health. In addition to various PM chemical compositions, biological components in the air may also impose threaten. Little is known about airborne microbial community in such severe air pollution conditions. PM2.5 and PM10 samples were collected during that 7-day pollution period. The 16S rRNA gene V3 amplification and the MiSeq sequencing were performed for analyzing these samples. It is found that there is no significant difference at phylum level for PM2.5 bacterial communities during that 7-day pollution period both at phylum and at genus level. At genus level, Arthrobacter and Frankia are the major airborne microbes presented in Beijing winter.samples. At genus level, there are 39 common genera (combined by first 50 genera bacterial of the two analysis) between the 16S rRNA gene analysis and those are found by Metagenomic analysis on the same PM samples. Frankia and Paracoccus are relatively more abundant in 16S rRNA gene data, while Kocuria and Geodermatophilus are relatively more abundant in Meta-data. PM10 bacterial communities are similar to those of PM2.5 with some noticeable differences, i.e., at phylum level, more Firmicutes and less Actinobacteria present in PM10 samples than in PM2.5 samples, while at genus level, more Clostridium presents in PM10 samples. The findings in Beijing were compared with three 16S rRNA gene studies in other countries. Although the sampling locations and times are different from each other, compositions of bacterial community are similar for those sampled at the ground atmosphere. Airborne microbial communities near the ground surface are different from those sampled in the upper troposphere.

摘要

2013年1月8日至14日期间,北京发生了严重的颗粒物(PM)污染事件。这些空气污染事件给公众健康带来了高风险。除了各种PM化学成分外,空气中的生物成分也可能构成威胁。对于在如此严重的空气污染条件下的空气传播微生物群落,人们了解甚少。在那7天的污染期内采集了PM2.5和PM10样本。对这些样本进行了16S rRNA基因V3扩增和MiSeq测序分析。结果发现,在那7天的污染期内,PM2.5细菌群落在门水平和属水平上均无显著差异。在属水平上,节杆菌属和弗兰克氏菌属是北京冬季空气中主要的空气传播微生物。在属水平上,16S rRNA基因分析与对相同PM样本进行宏基因组分析所发现的前50个属细菌中有39个共同属。弗兰克氏菌属和副球菌属在16S rRNA基因数据中相对更为丰富,而考克氏菌属和嗜皮菌属在宏基因组数据中相对更为丰富。PM10细菌群落与PM2.5的细菌群落相似,但也有一些明显差异,即,在门水平上,PM10样本中厚壁菌门比PM2.5样本中更多,放线菌门更少,而在属水平上,PM10样本中梭菌属更多。将北京的研究结果与其他国家的三项16S rRNA基因研究进行了比较。尽管采样地点和时间彼此不同,但在地面大气中采样的细菌群落组成相似。近地面的空气传播微生物群落与对流层上部采样的群落不同。

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