Alwarawrah Mohammad, Hussain Fazle, Huang Juyang
Department of Physics, Texas Tech University, Lubbock, TX 79409, United States.
Department of Mechanical Engineering, Texas Tech University, Lubbock, TX 79409, United States.
Biochim Biophys Acta. 2016 Feb;1858(2):253-63. doi: 10.1016/j.bbamem.2015.11.014. Epub 2015 Dec 1.
Diacylglycerols (DAGs) with unsaturated acyl chains play many important roles in biomembranes, such as a second messenger and activator for protein kinase C. In this study, three DAGs of distinctly different chain unsaturations (i.e. di16:0DAG (DPG), 16:0-18:1DAG (POG), and di18:1DAG (DOG)) are studied using atomistic MD simulation to compare their roles in the structure and dynamics of 16:0-18:1phosphatidylcholine (POPC) membranes. All three DAGs are able to produce the so-called 'condensing effect' in POPC membranes: decreasing area-per-lipid, and increasing acyl chain order and bilayer thickness. Our visual and quantitative analyses clearly show that DAG with unsaturated chains induce larger spacing between POPC headgroups, compared with DAG with saturated chains; this particular effect has long been hypothesized to be crucial for activating enzymes and receptors in cell membranes. DAGs with unsaturated chains are also located closer to the bilayer/aqueous interface than DPG and are more effective in slowing down lateral diffusion of molecules. We show that DAG molecules seek the "umbrella coverage" from neighboring phospholipid headgroups - similar to cholesterol. Unlike cholesterol, DAGs also hide their chains from water by laterally inserting their chains into the surrounding. Thus, acyl chains of DAG are more spread and disordered than those of PC due to the insertion. By calculating the potential of mean force (PMF) for POPC in POPC/DAG bilayers, we found that all three DAGs can significantly increase the free energy barrier for POPC to flip-flop, but only DAGs with unsaturated chains can additionally increase the free energy of POPC desorption.
具有不饱和酰基链的二酰基甘油(DAGs)在生物膜中发挥着许多重要作用,例如作为蛋白激酶C的第二信使和激活剂。在本研究中,使用原子分子动力学模拟研究了三种链不饱和度明显不同的DAG(即二16:0 DAG(DPG)、16:0-18:1 DAG(POG)和二18:1 DAG(DOG)),以比较它们在16:0-18:1磷脂酰胆碱(POPC)膜的结构和动力学中的作用。所有这三种DAG都能够在POPC膜中产生所谓的“凝聚效应”:降低每脂质面积,并增加酰基链有序度和双层厚度。我们的直观和定量分析清楚地表明,与具有饱和链的DAG相比,具有不饱和链的DAG会诱导POPC头部基团之间产生更大的间距;长期以来,人们一直假设这种特殊效应对于激活细胞膜中的酶和受体至关重要。具有不饱和链的DAG也比DPG更靠近双层/水界面,并且在减缓分子的横向扩散方面更有效。我们表明,DAG分子寻求来自相邻磷脂头部基团的“伞状覆盖”——类似于胆固醇。与胆固醇不同,DAG还通过将其链侧向插入周围环境来使其链免受水的影响。因此,由于插入作用,DAG的酰基链比PC的酰基链更伸展且无序。通过计算POPC/DAG双层中POPC的平均力势(PMF),我们发现所有这三种DAG都能显著增加POPC翻转的自由能垒,但只有具有不饱和链的DAG才能额外增加POPC解吸的自由能。