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DNA微阵列在临床诊断中的应用。

Application of DNA Microarray to Clinical Diagnostics.

作者信息

Patel Ankita, Cheung Sau W

机构信息

Medical Genetics Laboratories, Department of Molecular and Human Genetics, Baylor College of Medicine, One Baylor Plaza, Houston, TX, 77030, USA.

出版信息

Methods Mol Biol. 2016;1368:111-32. doi: 10.1007/978-1-4939-3136-1_9.

DOI:10.1007/978-1-4939-3136-1_9
PMID:26614072
Abstract

Microarray-based technology to conduct array comparative genomic hybridization (aCGH) has made a significant impact on the diagnosis of human genetic diseases. Such diagnoses, previously undetectable by traditional G-banding chromosome analysis, are now achieved by identifying genomic copy number variants (CNVs) using the microarray. Not only can hundreds of well-characterized genetic syndromes be detected in a single assay, but new genomic disorders and disease-causing genes can also be discovered through the utilization of aCGH technology. Although other platforms such as single nucleotide polymorphism (SNP) arrays can be used for detecting CNVs, in this chapter we focus on describing the methods for performing aCGH using Agilent oligonucleotide arrays for both prenatal (e.g., amniotic fluid and chorionic villus sample) and postnatal samples (e.g., blood).

摘要

基于微阵列的技术来进行阵列比较基因组杂交(aCGH),已对人类遗传疾病的诊断产生了重大影响。此类诊断以前通过传统的G显带染色体分析无法检测到,现在通过使用微阵列识别基因组拷贝数变异(CNV)得以实现。不仅可以在一次检测中检测出数百种特征明确的遗传综合征,还可以通过利用aCGH技术发现新的基因组疾病和致病基因。尽管其他平台如单核苷酸多态性(SNP)阵列可用于检测CNV,但在本章中,我们重点描述使用安捷伦寡核苷酸阵列对产前样本(如羊水和绒毛膜绒毛样本)和产后样本(如血液)进行aCGH的方法。

相似文献

1
Application of DNA Microarray to Clinical Diagnostics.DNA微阵列在临床诊断中的应用。
Methods Mol Biol. 2016;1368:111-32. doi: 10.1007/978-1-4939-3136-1_9.
2
Chromosomal Microarray Analysis Using Array Comparative Genomic Hybridization on DNA from Amniotic Fluid and Chorionic Villus Sampling.使用羊水和绒毛取样的DNA进行阵列比较基因组杂交的染色体微阵列分析。
Methods Mol Biol. 2019;1885:171-186. doi: 10.1007/978-1-4939-8889-1_12.
3
Comprehensive performance comparison of high-resolution array platforms for genome-wide Copy Number Variation (CNV) analysis in humans.用于人类全基因组拷贝数变异(CNV)分析的高分辨率阵列平台的综合性能比较
BMC Genomics. 2017 Apr 24;18(1):321. doi: 10.1186/s12864-017-3658-x.
4
[Current limitations and difficulties in application of microarray comparative genomic hybridization in prenatal diagnosis].[微阵列比较基因组杂交技术在产前诊断应用中的当前局限性与困难]
Zhonghua Yi Xue Yi Chuan Xue Za Zhi. 2011 Feb;28(1):47-51. doi: 10.3760/cma.j.issn.1003-9406.2011.01.011.
5
Introducing array comparative genomic hybridization into routine prenatal diagnosis practice: a prospective study on over 1000 consecutive clinical cases.将 array comparative genomic hybridization 引入常规产前诊断实践:超过 1000 例连续临床病例的前瞻性研究。
Prenat Diagn. 2011 Dec;31(13):1270-82. doi: 10.1002/pd.2884. Epub 2011 Oct 28.
6
aCGH on chorionic villi mirrors the complexity of fetoplacental mosaicism in prenatal diagnosis.绒毛活检的 aCGH 反映了产前诊断中胎胎盘嵌合体的复杂性。
Prenat Diagn. 2011 May;31(5):473-8. doi: 10.1002/pd.2721. Epub 2011 Feb 24.
7
[SNP microarray analysis of retention abortion chorionic villus].稽留流产绒毛组织的单核苷酸多态性微阵列分析
Zhonghua Yi Xue Yi Chuan Xue Za Zhi. 2015 Apr;32(2):180-2. doi: 10.3760/cma.j.issn.1003-9406.2015.02.006.
8
Comparative genomic hybridization and prenatal diagnosis.比较基因组杂交与产前诊断。
Curr Opin Obstet Gynecol. 2006 Apr;18(2):185-91. doi: 10.1097/01.gco.0000192986.22718.cc.
9
Prenatal chromosomal microarray analysis in a diagnostic laboratory; experience with >1000 cases and review of the literature.产前染色体微阵列分析在诊断实验室中的应用;超过 1000 例的经验和文献回顾。
Prenat Diagn. 2012 Apr;32(4):351-61. doi: 10.1002/pd.3861.
10
Full complexity genomic hybridization on 60-mer oligonucleotide microarrays for array comparative genomic hybridization (aCGH).用于阵列比较基因组杂交(aCGH)的60聚体寡核苷酸微阵列上的全复杂度基因组杂交。
Methods Mol Biol. 2008;439:87-100. doi: 10.1007/978-1-59745-188-8_6.

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