从一名尿路感染患者分离出的粘质沙雷氏菌菌株RM66262的全基因组序列草图
Draft Whole-Genome Sequence of Serratia marcescens Strain RM66262, Isolated from a Patient with a Urinary Tract Infection.
作者信息
Bruna Roberto E, Revale Santiago, García Véscovi Eleonora, Mariscotti Javier F
机构信息
Instituto de Biología Molecular y Celular de Rosario (IBR-CONICET), Departamento de Microbiología, Facultad de Ciencias Bioquímicas y Farmacéuticas, Universidad Nacional de Rosario, Rosario, Argentina.
Instituto de Agrobiotecnología Rosario (INDEAR)-CONICET, Rosario, Argentina.
出版信息
Genome Announc. 2015 Dec 3;3(6):e01423-15. doi: 10.1128/genomeA.01423-15.
Abstract
Serratia marcescens strains are ubiquitous bacteria isolated from environmental niches and also constitute emergent nosocomial opportunistic pathogens. Here, we report on the draft genome sequence of S. marcescens strain RM66262, which was isolated from a patient with urinary tract infection in the Bacteriology Service of the Rosario National University, Rosario, Argentina.
摘要
粘质沙雷氏菌菌株是从环境生态位中分离出的普遍存在的细菌，也是新出现的医院机会致病菌。在此，我们报告了粘质沙雷氏菌菌株RM66262的基因组草图序列，该菌株是从阿根廷罗萨里奥国立大学细菌学服务部一名尿路感染患者中分离出来的。
相似文献
1
Draft Whole-Genome Sequence of Serratia marcescens Strain RM66262, Isolated from a Patient with a Urinary Tract Infection.从一名尿路感染患者分离出的粘质沙雷氏菌菌株RM66262的全基因组序列草图
Genome Announc. 2015 Dec 3;3(6):e01423-15. doi: 10.1128/genomeA.01423-15.
2
Pathogenicity of Serratia marcescens Strains in Honey Bees.蜂群中粘质沙雷氏菌的致病性。
mBio. 2018 Oct 9;9(5):e01649-18. doi: 10.1128/mBio.01649-18.
3
Draft genome sequence of a GES-5-producing Serratia marcescens isolated in southern Brazil.从巴西南部分离出的一株产GES-5的粘质沙雷氏菌的基因组序列草图
Braz J Microbiol. 2017 Apr-Jun;48(2):191-192. doi: 10.1016/j.bjm.2016.08.002. Epub 2016 Nov 23.
4
Draft Genome Sequence of a Multidrug-Resistant Nosocomial Strain That Persisted in a Hospital in Kemerovo, Russian Federation.一株耐多药医院菌株的基因组序列草图，该菌株曾在俄罗斯联邦克麦罗沃市一家医院持续存在
Genome Announc. 2017 Mar 9;5(10):e01764-16. doi: 10.1128/genomeA.01764-16.
5
Complete Genome Sequence of Serratia marcescens U36365, a Green Pigment-Producing Strain Isolated from a Patient with Urinary Tract Infection.从一名尿路感染患者中分离出的产绿色色素菌株粘质沙雷氏菌U36365的全基因组序列
Genome Announc. 2016 Aug 11;4(4):e00837-16. doi: 10.1128/genomeA.00837-16.
6
Draft Whole-Genome Sequence of Serratia marcescens Strain MCB, Associated with Oscheius sp. MCB (Nematoda: Rhabditidae) Isolated from South Africa.与从南非分离出的奥氏线虫属MCB（线虫纲：小杆科）相关的粘质沙雷氏菌菌株MCB的全基因组序列草图
Genome Announc. 2014 Sep 18;2(5):e00911-14. doi: 10.1128/genomeA.00911-14.
7
Draft Genome Sequence of the Serratia marcescens Strain VGH107, a Taiwanese Clinical Isolate.台湾临床分离株粘质沙雷氏菌VGH107的基因组序列草图
Genome Announc. 2013 May 16;1(3):e00249-13. doi: 10.1128/genomeA.00249-13.
8
A nosocomial epidemic of antibiotic-resistant Serratia marcescens urinary tract infections.一起由耐抗生素的粘质沙雷氏菌引起的医院内尿路感染疫情。
J Urol. 1980 Oct;124(4):498-502. doi: 10.1016/s0022-5347(17)55511-1.
9
[Two nosocomial outbreaks of sepsis caused by Serratia marcescens, which occurred in July 1999 and January 2002--Tokyo].[1999年7月和2002年1月在东京发生的两起由粘质沙雷氏菌引起的医院败血症暴发]
Kansenshogaku Zasshi. 2004 Apr;78(4):295-304. doi: 10.11150/kansenshogakuzasshi1970.78.295.
10
Pangenome of Serratia marcescens strains from nosocomial and environmental origins reveals different populations and the links between them.来自医院和环境来源的粘质沙雷氏菌菌株的泛基因组揭示了不同的种群及其之间的联系。
Sci Rep. 2019 Jan 10;9(1):46. doi: 10.1038/s41598-018-37118-0.
引用本文的文献
1
Unraveling the role of UilS, a urea-induced acyl-homoserine lactonase that enhances fitness, interbacterial competition, and urinary tract infection.解析尿素诱导型酰基高丝氨酸内酯酶UilS的作用，该酶可增强适应性、细菌间竞争及尿路感染。
mBio. 2024 Dec 11;15(12):e0250524. doi: 10.1128/mbio.02505-24. Epub 2024 Oct 30.
2
The fliR gene contributes to the virulence of S. marcescens in a Drosophila intestinal infection model. fliR 基因在果蝇肠道感染模型中有助于 S. marcescens 的毒力。
Sci Rep. 2022 Feb 23;12(1):3068. doi: 10.1038/s41598-022-06780-w.
3
Serratia marcescens RamA Expression Is under PhoP-Dependent Control and Modulates Lipid A-Related Gene Transcription and Antibiotic Resistance Phenotypes.粘质沙雷氏菌 RamA 表达受 PhoP 依赖调控，并调节脂 A 相关基因转录和抗生素耐药表型。
J Bacteriol. 2021 Jun 8;203(13):e0052320. doi: 10.1128/JB.00523-20.
4
CpxR-Dependent Thermoregulation of Serratia marcescens PrtA Metalloprotease Expression and Its Contribution to Bacterial Biofilm Formation.CpxR 依赖调控粘质沙雷氏菌 PrtA 金属蛋白酶表达及其对生物膜形成的贡献。
J Bacteriol. 2018 Mar 26;200(8). doi: 10.1128/JB.00006-18. Print 2018 Apr 15.
5
A Transcriptional Regulatory Mechanism Finely Tunes the Firing of Type VI Secretion System in Response to Bacterial Enemies.一种转录调控机制可精细调节 VI 型分泌系统的启动，以响应细菌敌人。
mBio. 2017 Aug 22;8(4):e00559-17. doi: 10.1128/mBio.00559-17.
6
Mechanisms of Bacterial (Serratia marcescens) Attachment to, Migration along, and Killing of Fungal Hyphae.细菌（粘质沙雷氏菌）附着于真菌菌丝、沿真菌菌丝迁移并杀死真菌菌丝的机制。
Appl Environ Microbiol. 2016 Apr 18;82(9):2585-94. doi: 10.1128/AEM.04070-15. Print 2016 May.
本文引用的文献
1
A5-miseq: an updated pipeline to assemble microbial genomes from Illumina MiSeq data.A5-miseq：一种用于从Illumina MiSeq数据组装微生物基因组的更新流程。
Bioinformatics. 2015 Feb 15;31(4):587-9. doi: 10.1093/bioinformatics/btu661. Epub 2014 Oct 22.
2
Serratia marcescens ShlA pore-forming toxin is responsible for early induction of autophagy in host cells and is transcriptionally regulated by RcsB.粘质沙雷氏菌 ShlA 孔形成毒素负责诱导宿主细胞早期自噬，其转录受到 RcsB 的调控。
Infect Immun. 2014 Sep;82(9):3542-54. doi: 10.1128/IAI.01682-14. Epub 2014 Jun 9.
3
An integrated pipeline for de novo assembly of microbial genomes.用于从头组装微生物基因组的集成管道。
PLoS One. 2012;7(9):e42304. doi: 10.1371/journal.pone.0042304. Epub 2012 Sep 13.
4
Biogenesis of outer membrane vesicles in Serratia marcescens is thermoregulated and can be induced by activation of the Rcs phosphorelay system.粘质沙雷氏菌外膜囊泡的生物发生受温度调控，并可通过 Rcs 磷酸传递系统的激活而诱导。
J Bacteriol. 2012 Jun;194(12):3241-9. doi: 10.1128/JB.00016-12. Epub 2012 Apr 6.
5
The PhoP/PhoQ system and its role in Serratia marcescens pathogenesis.磷酸烯醇式丙酮酸/磷酸烯醇丙酮酸受体系统及其在粘质沙雷氏菌发病机制中的作用。
J Bacteriol. 2012 Jun;194(11):2949-61. doi: 10.1128/JB.06820-11. Epub 2012 Mar 30.
6
Serratia infections: from military experiments to current practice.沙雷氏菌感染：从军事实验到当前实践。
Clin Microbiol Rev. 2011 Oct;24(4):755-91. doi: 10.1128/CMR.00017-11.
7
Serratia marcescens is able to survive and proliferate in autophagic-like vacuoles inside non-phagocytic cells.黏质沙雷氏菌能够在非吞噬细胞的自噬样小泡中存活和增殖。
PLoS One. 2011;6(8):e24054. doi: 10.1371/journal.pone.0024054. Epub 2011 Aug 25.
8
The Rcs signal transduction pathway is triggered by enterobacterial common antigen structure alterations in Serratia marcescens.Rcs 信号转导途径是由粘质沙雷氏菌中肠杆菌共同抗原结构改变触发的。
J Bacteriol. 2011 Jan;193(1):63-74. doi: 10.1128/JB.00839-10. Epub 2010 Oct 22.
9
The RAST Server: rapid annotations using subsystems technology.RAST服务器：使用子系统技术进行快速注释。
BMC Genomics. 2008 Feb 8;9:75. doi: 10.1186/1471-2164-9-75.
10
Enterobacterial common antigen integrity is a checkpoint for flagellar biogenesis in Serratia marcescens.肠杆菌共同抗原完整性是粘质沙雷氏菌鞭毛生物合成的一个检查点。
J Bacteriol. 2008 Jan;190(1):213-20. doi: 10.1128/JB.01348-07. Epub 2007 Nov 2.
Zotero 插件