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利用高光谱反射成像技术对灰葡萄孢、匍枝根霉和尖孢炭疽菌进行生长模拟与鉴别

Growth Simulation and Discrimination of Botrytis cinerea, Rhizopus stolonifer and Colletotrichum acutatum Using Hyperspectral Reflectance Imaging.

作者信息

Sun Ye, Gu Xinzhe, Wang Zhenjie, Huang Yangmin, Wei Yingying, Zhang Miaomiao, Tu Kang, Pan Leiqing

机构信息

College of Food Science and Technology, Nanjing Agricultural University, No.1, Weigang Road, Nanjing, Jiangsu, 210095, China.

出版信息

PLoS One. 2015 Dec 7;10(12):e0143400. doi: 10.1371/journal.pone.0143400. eCollection 2015.

Abstract

This research aimed to develop a rapid and nondestructive method to model the growth and discrimination of spoilage fungi, like Botrytis cinerea, Rhizopus stolonifer and Colletotrichum acutatum, based on hyperspectral imaging system (HIS). A hyperspectral imaging system was used to measure the spectral response of fungi inoculated on potato dextrose agar plates and stored at 28°C and 85% RH. The fungi were analyzed every 12 h over two days during growth, and optimal simulation models were built based on HIS parameters. The results showed that the coefficients of determination (R2) of simulation models for testing datasets were 0.7223 to 0.9914, and the sum square error (SSE) and root mean square error (RMSE) were in a range of 2.03-53.40×10(-4) and 0.011-0.756, respectively. The correlation coefficients between the HIS parameters and colony forming units of fungi were high from 0.887 to 0.957. In addition, fungi species was discriminated by partial least squares discrimination analysis (PLSDA), with the classification accuracy of 97.5% for the test dataset at 36 h. The application of this method in real food has been addressed through the analysis of Botrytis cinerea, Rhizopus stolonifer and Colletotrichum acutatum inoculated in peaches, demonstrating that the HIS technique was effective for simulation of fungal infection in real food. This paper supplied a new technique and useful information for further study into modeling the growth of fungi and detecting fruit spoilage caused by fungi based on HIS.

摘要

本研究旨在开发一种基于高光谱成像系统(HIS)的快速无损方法,用于对灰葡萄孢、匍枝根霉和尖孢炭疽菌等腐败真菌的生长和鉴别进行建模。使用高光谱成像系统测量接种在马铃薯葡萄糖琼脂平板上并在28°C和85%相对湿度下储存的真菌的光谱响应。在真菌生长的两天内,每12小时对其进行分析,并基于HIS参数建立最佳模拟模型。结果表明,测试数据集模拟模型的决定系数(R2)为0.7223至0.9914,误差平方和(SSE)和均方根误差(RMSE)分别在2.03 - 53.40×10(-4)和0.011 - 0.756范围内。HIS参数与真菌菌落形成单位之间的相关系数较高,为0.887至0.957。此外,通过偏最小二乘判别分析(PLSDA)对真菌种类进行了鉴别,在36小时时测试数据集的分类准确率为97.5%。通过对接种在桃子上的灰葡萄孢、匍枝根霉和尖孢炭疽菌的分析,探讨了该方法在实际食品中的应用,表明HIS技术对模拟实际食品中的真菌感染是有效的。本文为基于HIS对真菌生长建模和检测由真菌引起的水果腐败的进一步研究提供了一种新技术和有用信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2d18/4671615/19ebd3d6f7ac/pone.0143400.g001.jpg

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