Suppr超能文献

家蚕Bmovo-1与野生型家蚕卵巢的比较转录组分析

Comparative transcriptomic analysis of silkworm Bmovo-1 and wild type silkworm ovary.

作者信息

Xue Renyu, Hu Xiaolong, Zhu Liyuan, Cao Guangli, Huang Moli, Xue Gaoxu, Song Zuowei, Lu Jiayu, Chen Xueying, Gong Chengliang

机构信息

School of Biology &Basic Medical Science, Soochow University, Suzhou 215123, China.

National Engineering Laboratory for Modern Silk, Soochow University, Suzhou, PR China.

出版信息

Sci Rep. 2015 Dec 8;5:17867. doi: 10.1038/srep17867.

Abstract

The detailed molecular mechanism of Bmovo-1 regulation of ovary size is unclear. To uncover the mechanism of Bmovo-1 regulation of ovarian development and oogenesis using RNA-Seq, we compared the transcriptomes of wild type (WT) and Bmovo-1-overexpressing silkworm (silkworm(+Bmovo-1)) ovaries. Using a pair-end Illumina Solexa sequencing strategy, 5,296,942 total reads were obtained from silkworm(+Bmovo-1) ovaries and 6,306,078 from WT ovaries. The average read length was about 100 bp. Clean read ratios were 98.79% for silkworm(+Bmovo-1) and 98.87% for WT silkworm ovaries. Comparative transcriptome analysis showed 123 upregulated and 111 downregulated genes in silkworm(+Bmovo-1) ovaries. These differentially expressed genes were enriched in the extracellular and extracellular spaces and involved in metabolism, genetic information processing, environmental information processing, cellular processes and organismal systems. Bmovo-1 overexpression in silkworm ovaries might promote anabolism for ovarian development and oogenesis and oocyte proliferation and transport of nutrients to ovaries by altering nutrient partitioning, which would support ovary development. Excessive consumption of nutrients for ovary development alters nutrient partitioning and deters silk protein synthesis.

摘要

Bmovo-1调控卵巢大小的详细分子机制尚不清楚。为了利用RNA测序揭示Bmovo-1调控卵巢发育和卵子发生的机制,我们比较了野生型(WT)和过表达Bmovo-1的家蚕(家蚕(+Bmovo-1))卵巢的转录组。采用双末端Illumina Solexa测序策略,从家蚕(+Bmovo-1)卵巢获得5,296,942条总读数,从WT卵巢获得6,306,078条。平均读数长度约为100 bp。家蚕(+Bmovo-1)的清洁读数比率为98.79%,WT家蚕卵巢的清洁读数比率为98.87%。比较转录组分析显示,家蚕(+Bmovo-1)卵巢中有123个基因上调,111个基因下调。这些差异表达的基因在细胞外和细胞外空间中富集,参与代谢、遗传信息处理、环境信息处理、细胞过程和机体系统。在家蚕卵巢中过表达Bmovo-1可能通过改变营养分配来促进卵巢发育和卵子发生的合成代谢以及卵母细胞增殖和营养物质向卵巢的转运,这将支持卵巢发育。卵巢发育过度消耗营养会改变营养分配并阻碍丝蛋白合成。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a60e/4672304/224443cb9125/srep17867-f1.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验