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原发性胆汁性肝硬化的全基因组关联研究

Genome-Wide Association Studies in Primary Biliary Cirrhosis.

作者信息

Gulamhusein Aliya F, Juran Brian D, Lazaridis Konstantinos N

机构信息

Division of Gastroenterology and Hepatology, Mayo Clinic College of Medicine, Rochester, Minnesota.

出版信息

Semin Liver Dis. 2015 Nov;35(4):392-401. doi: 10.1055/s-0035-1567831. Epub 2015 Dec 16.

Abstract

Genome-wide association studies (GWASs) have been a significant technological advance in our ability to evaluate the genetic architecture of complex diseases such as primary biliary cirrhosis (PBC). To date, six large-scale studies have been performed that have identified 27 risk loci in addition to human leukocyte antigen (HLA) associated with PBC. The identified risk variants emphasize important disease concepts; namely, that disturbances in immunoregulatory pathways are important in the pathogenesis of PBC and that such perturbations are shared among a diverse number of autoimmune diseases-suggesting the risk architecture may confer a generalized propensity to autoimmunity not necessarily specific to PBC. Furthermore, the impact of non-HLA risk variants, particularly in genes involved with interleukin-12 signaling, and ethnic variation in conferring susceptibility to PBC have been highlighted. Although GWASs have been a critical stepping stone in understanding common genetic variation contributing to PBC, limitations pertaining to power, sample availability, and strong linkage disequilibrium across genes have left us with an incomplete understanding of the genetic underpinnings of disease pathogenesis. Future efforts to gain insight into this missing heritability, the genetic variation that contributes to important disease outcomes, and the functional consequences of associated variants will be critical if practical clinical translation is to be realized.

摘要

全基因组关联研究(GWAS)是我们评估原发性胆汁性肝硬化(PBC)等复杂疾病遗传结构能力方面的一项重大技术进步。迄今为止,已经开展了六项大规模研究,除了与PBC相关的人类白细胞抗原(HLA)外,还确定了27个风险位点。所确定的风险变异强调了重要的疾病概念;也就是说,免疫调节途径的紊乱在PBC的发病机制中很重要,而且这种扰动在多种自身免疫性疾病中都存在——这表明风险结构可能赋予了一种对自身免疫的普遍倾向,而不一定是PBC特有的。此外,非HLA风险变异的影响,特别是在与白细胞介素-12信号传导相关的基因中,以及种族差异对PBC易感性的影响也得到了强调。尽管GWAS是理解导致PBC的常见遗传变异的关键一步,但由于效力、样本可用性以及基因间强连锁不平衡等方面的限制,我们对疾病发病机制的遗传基础仍缺乏完整的理解。如果要实现实际的临床转化,未来努力深入了解这种缺失的遗传度、导致重要疾病结局的遗传变异以及相关变异的功能后果将至关重要。

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