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一种用于中子晶体结构分析的有效氘交换方法及去折叠-重折叠过程

An Effective Deuterium Exchange Method for Neutron Crystal Structure Analysis with Unfolding-Refolding Processes.

作者信息

Kita Akiko, Morimoto Yukio

机构信息

Division of the Quantum Beam Material Science, Research Reactor Institute, Kyoto University, Kumatori, Osaka, 590-0494, Japan.

出版信息

Mol Biotechnol. 2016 Feb;58(2):130-6. doi: 10.1007/s12033-015-9908-8.

Abstract

A method of hydrogen/deuterium (H/D) exchange with an unfolding-refolding process has been applied to hen egg-white lysozyme (HWL), and accurate evaluation of its deuteration was carried out by time-of-flight mass spectroscopy. Neutron crystallography requires a suitable crystal with enough deuterium exchanged in the protein to decrease incoherent scattering from hydrogens. It is very expensive to prepare a fully deuterated protein, and therefore a simple H/D exchange technique is desirable for this purpose. Acid or base addition to protein solutions with heating effectively increased the number of deuterium up to more than 20 % of that of all hydrogen atoms, and refolded structures were determined by X-ray structure analysis at 1.8 Å resolution. Refolded HWL had increased deuterium content in its protein core and its native structure, determined at atomic resolution, was fully preserved.

摘要

一种将氢/氘(H/D)交换与去折叠-再折叠过程相结合的方法已应用于鸡蛋清溶菌酶(HWL),并通过飞行时间质谱对其氘化情况进行了精确评估。中子晶体学需要合适的晶体,其中蛋白质中有足够的氘交换,以减少氢的非相干散射。制备完全氘化的蛋白质成本非常高,因此为此目的需要一种简单的H/D交换技术。向蛋白质溶液中添加酸或碱并加热可有效增加氘的数量,使其达到所有氢原子数量的20%以上,并且通过分辨率为1.8 Å的X射线结构分析确定了再折叠结构。再折叠的HWL在其蛋白质核心中的氘含量增加,并且在原子分辨率下确定其天然结构得到了完全保留。

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