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利用非裔美国人400年的生物史,你能做些什么?评估对17世纪至20世纪非裔美国人的牙齿和骨骼材料进行系统研究的潜在科学益处。

What could you do with 400 years of biological history on african americans? Evaluating the potential scientific benefit of systematic studies of dental and skeletal materials on African Americans from the 17th through 20th centuries.

作者信息

Jackson Fatimah, Jackson Latifa, Cross Christopher, Clarke Cameron

机构信息

Cobb Research Laboratory, College of Arts and Sciences, Howard University, Washington, DC.

Department of Biology, College of Arts and Sciences, Howard University, Washington, DC.

出版信息

Am J Hum Biol. 2016 Jul;28(4):510-3. doi: 10.1002/ajhb.22821. Epub 2016 Jan 9.

Abstract

OBJECTIVES

How important is it to be able to reconstruct the lives of a highly diverse, historically recent macroethnic group over the course of 400 years? How many insights into human evolutionary biology and disease susceptibilities could be gained, even with this relatively recent window into the past? In this article, we explore the potential ramifications of a newly constructed dataset of Four Centuries of African American Biological Variation (4Cs).

METHODS

This article provides initial lists of digitized variables formatted as SQL tables for the 17th and 18th century samples and for the 19th and 20th century samples.

RESULTS

This database is dynamic and new information is added yearly. The database provides novel opportunities for significant insights into the past biological history of this group and three case study applications are detailed for comparative computational systems biology studies of (1) hypertension, (2) the oral microbiome, and (3) mental health disorders.

CONCLUSIONS

The 4Cs dataset is ideal for interdisciplinary "next generation" science research and these data represent a unique step toward the accumulation of historically contextualized Big Data on an underrepresented group known to have experienced differential survival over time. Am. J. Hum. Biol. 28:510-513, 2016. © 2016 The Authors American Journal of Human Biology Published byWiley Periodicals, Inc.

摘要

目标

能够重构一个高度多样化、历史时期较近的宏观族群在400年中的生活状况有多重要?即便只是透过这个相对较近的历史窗口,又能对人类进化生物学和疾病易感性有多少深入了解?在本文中,我们探讨一个新构建的“四个世纪的非裔美国人生物变异”(4Cs)数据集可能产生的影响。

方法

本文提供了以SQL表格式呈现的数字化变量的初始列表,涉及17和18世纪样本以及19和20世纪样本。

结果

该数据库是动态的,每年都会添加新信息。该数据库为深入了解该群体过去的生物历史提供了新机会,详细介绍了三个案例研究应用,用于(1)高血压、(2)口腔微生物组和(3)精神疾病的比较计算系统生物学研究。

结论

4Cs数据集非常适合跨学科的“下一代”科学研究,这些数据代表了朝着积累关于一个长期经历不同生存状况的代表性不足群体的具有历史背景的大数据迈出的独特一步。《美国人类生物学杂志》2016年第28卷:510 - 513页。© 2016作者。《美国人类生物学杂志》由威利期刊公司出版。

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本文引用的文献

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Ancient DNA analysis of dental calculus.牙结石的古DNA分析
J Hum Evol. 2015 Feb;79:119-24. doi: 10.1016/j.jhevol.2014.06.018. Epub 2014 Dec 1.
3
Advancements toward a systems level understanding of the human oral microbiome.对人类口腔微生物群进行系统层面理解的进展。
Front Cell Infect Microbiol. 2014 Jul 29;4:98. doi: 10.3389/fcimb.2014.00098. eCollection 2014.
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Biology: The big challenges of big data.生物学:大数据的巨大挑战。
Nature. 2013 Jun 13;498(7453):255-60. doi: 10.1038/498255a.
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J Bacteriol. 2010 Oct;192(19):5002-17. doi: 10.1128/JB.00542-10. Epub 2010 Jul 23.
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Hypertension: trends in prevalence, incidence, and control.高血压:患病率、发病率及控制情况的趋势
Annu Rev Public Health. 2006;27:465-90. doi: 10.1146/annurev.publhealth.27.021405.102132.

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