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Mechanism and regulation of the nonsense-mediated decay pathway.

作者信息

Hug Nele, Longman Dasa, Cáceres Javier F

机构信息

Medical Research Council Human Genetics Unit, Institute of Genetics and Molecular Medicine, University of Edinburgh, Western General Hospital, Edinburgh, EH4 2XU, UK.

Medical Research Council Human Genetics Unit, Institute of Genetics and Molecular Medicine, University of Edinburgh, Western General Hospital, Edinburgh, EH4 2XU, UK

出版信息

Nucleic Acids Res. 2016 Feb 29;44(4):1483-95. doi: 10.1093/nar/gkw010. Epub 2016 Jan 14.


DOI:10.1093/nar/gkw010
PMID:26773057
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4770240/
Abstract

The Nonsense-mediated mRNA decay (NMD) pathway selectively degrades mRNAs harboring premature termination codons (PTCs) but also regulates the abundance of a large number of cellular RNAs. The central role of NMD in the control of gene expression requires the existence of buffering mechanisms that tightly regulate the magnitude of this pathway. Here, we will focus on the mechanism of NMD with an emphasis on the role of RNA helicases in the transition from NMD complexes that recognize a PTC to those that promote mRNA decay. We will also review recent strategies aimed at uncovering novel trans-acting factors and their functional role in the NMD pathway. Finally, we will describe recent progress in the study of the physiological role of the NMD response.

摘要
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb90/4770240/f8eb29e1ac0f/gkw010fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb90/4770240/099a5c3cadb7/gkw010fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb90/4770240/3f0e866355a5/gkw010fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb90/4770240/7ae44822c08f/gkw010fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb90/4770240/f8eb29e1ac0f/gkw010fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb90/4770240/099a5c3cadb7/gkw010fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb90/4770240/3f0e866355a5/gkw010fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb90/4770240/7ae44822c08f/gkw010fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb90/4770240/f8eb29e1ac0f/gkw010fig4.jpg

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[3]
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[10]
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本文引用的文献

[1]
The exon junction complex as a node of post-transcriptional networks.

Nat Rev Mol Cell Biol. 2015-12-16

[2]
Antisense oligonucleotide-directed inhibition of nonsense-mediated mRNA decay.

Nat Biotechnol. 2016-2

[3]
Nonsense-Mediated mRNA Decay: Degradation of Defective Transcripts Is Only Part of the Story.

Annu Rev Genet. 2015

[4]
Nonsense-mediated mRNA decay: an intricate machinery that shapes transcriptomes.

Nat Rev Mol Cell Biol. 2015-9-23

[5]
NBAS mutations cause a multisystem disorder involving bone, connective tissue, liver, immune system, and retina.

Am J Med Genet A. 2015-12

[6]
Mechanism, factors, and physiological role of nonsense-mediated mRNA decay.

Cell Mol Life Sci. 2015-12

[7]
Target Discrimination in Nonsense-Mediated mRNA Decay Requires Upf1 ATPase Activity.

Mol Cell. 2015-8-6

[8]
Human Upf1 is a highly processive RNA helicase and translocase with RNP remodelling activities.

Nat Commun. 2015-7-3

[9]
A network of SMG-8, SMG-9 and SMG-1 C-terminal insertion domain regulates UPF1 substrate recruitment and phosphorylation.

Nucleic Acids Res. 2015-9-3

[10]
Biallelic Mutations in NBAS Cause Recurrent Acute Liver Failure with Onset in Infancy.

Am J Hum Genet. 2015-7-2

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