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血清螺菌NAD⁺合成酶NadE1的体外特性研究

In vitro characterization of the NAD+ synthetase NadE1 from Herbaspirillum seropedicae.

作者信息

Laskoski Kerly, Santos Adrian R S, Bonatto Ana C, Pedrosa Fábio O, Souza Emanuel M, Huergo Luciano F

机构信息

Departamento de Bioquímica e Biologia Molecular, Curitiba, Brazil.

Departamento de Genética, UFPR, Curitiba, PR, Brazil.

出版信息

Arch Microbiol. 2016 May;198(4):307-13. doi: 10.1007/s00203-016-1190-z. Epub 2016 Jan 22.

Abstract

Nicotinamide adenine dinucleotide synthetase enzyme (NadE) catalyzes the amination of nicotinic acid adenine dinucleotide (NaAD) to form NAD(+). This reaction represents the last step in the majority of the NAD(+) biosynthetic routes described to date. NadE enzymes typically use either glutamine or ammonium as amine nitrogen donor, and the reaction is energetically driven by ATP hydrolysis. Given the key role of NAD(+) in bacterial metabolism, NadE has attracted considerable interest as a potential target for the development of novel antibiotics. The plant-associative nitrogen-fixing bacteria Herbaspirillum seropedicae encodes two putative NadE, namely nadE1 and nadE2. The nadE1 gene is linked to glnB encoding the signal transduction protein GlnB. Here we report the purification and in vitro characterization of H. seropedicae NadE1. Gel filtration chromatography analysis suggests that NadE1 is an octamer. The NadE1 activity was assayed in vitro, and the Michaelis-Menten constants for substrates NaAD, ATP, glutamine and ammonium were determined. Enzyme kinetic and in vitro substrate competition assays indicate that H. seropedicae NadE1 uses glutamine as a preferential nitrogen donor.

摘要

烟酰胺腺嘌呤二核苷酸合成酶(NadE)催化烟酸腺嘌呤二核苷酸(NaAD)的胺化反应以形成NAD⁺。该反应是迄今为止所描述的大多数NAD⁺生物合成途径中的最后一步。NadE酶通常使用谷氨酰胺或铵作为胺氮供体,并且该反应由ATP水解提供能量驱动。鉴于NAD⁺在细菌代谢中的关键作用,NadE作为新型抗生素开发的潜在靶点已引起了相当大的关注。与植物共生的固氮细菌巴西固氮螺菌编码两种假定的NadE,即nadE1和nadE2。nadE1基因与编码信号转导蛋白GlnB的glnB相连。在此我们报道了巴西固氮螺菌NadE1的纯化及体外特性研究。凝胶过滤色谱分析表明NadE1是一种八聚体。在体外测定了NadE1的活性,并确定了底物NaAD、ATP、谷氨酰胺和铵的米氏常数。酶动力学和体外底物竞争试验表明,巴西固氮螺菌NadE1优先使用谷氨酰胺作为氮供体。

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