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非核糖体肽合成酶中腺苷化活性的比色检测

Colorimetric Detection of the Adenylation Activity in Nonribosomal Peptide Synthetases.

作者信息

Maruyama Chitose, Niikura Haruka, Takakuwa Masahiro, Katano Hajime, Hamano Yoshimitsu

机构信息

Department of Bioscience, Fukui Prefectural University, 4-1-1 Matsuoka-Kenjojima, Eiheiji-cho, Yoshida-gun, Fukui, 910-1195, Japan.

出版信息

Methods Mol Biol. 2016;1401:77-84. doi: 10.1007/978-1-4939-3375-4_5.

Abstract

Nonribosomal peptide synthetases (NRPSs) are multifunctional enzymes consisting of catalytic domains. The substrate specificities of adenylation (A) domains determine the amino-acid building blocks to be incorporated during nonribosomal peptide biosynthesis. The A-domains mediate ATP-dependent activation of amino-acid substrates as aminoacyl-O-AMP with pyrophosphate (PPi) release. Traditionally, the enzymatic activity of the A-domains has been measured by radioactive ATP-[(32)P]-PPi exchange assays with the detection of (32)P-labeled ATP. Recently, we developed a colorimetric assay for the direct detection of PPi as a yellow 18-molybdopyrophosphate anion ((P2O7)Mo18O54). (P2O7)Mo18O54 was further reduced by ascorbic acid to give a more readily distinguishable blue coloration. Here we demonstrate the lab protocols for the colorimetric assay of PPi released in A-domain reactions.

摘要

非核糖体肽合成酶(NRPSs)是由催化结构域组成的多功能酶。腺苷化(A)结构域的底物特异性决定了非核糖体肽生物合成过程中要掺入的氨基酸构建块。A结构域介导氨基酸底物的ATP依赖性活化,生成氨酰基-O-AMP并释放焦磷酸(PPi)。传统上,A结构域的酶活性通过放射性ATP-[(32)P]-PPi交换测定法来测量,检测(32)P标记的ATP。最近,我们开发了一种比色测定法,用于直接检测作为黄色18-钼焦磷酸阴离子((P2O7)Mo18O54)的PPi。(P2O7)Mo18O54被抗坏血酸进一步还原,产生更易于区分的蓝色。在这里,我们展示了用于比色测定A结构域反应中释放的PPi的实验方案。

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