Veena Vijay Kumar, Kennedy Kamaraj, Lakshmi Pragna, Krishna R, Sakthivel N
Department of Biotechnology, School of Life Science, Pondicherry University, Pondicherry, 605014, India.
Centre for Bioinformatics, School of Life Science, Pondicherry University, Pondicherry, India.
Mol Cell Biochem. 2016 Mar;414(1-2):47-56. doi: 10.1007/s11010-016-2657-6. Epub 2016 Feb 1.
The microbial polyketide, 2, 4-diacetylphloroglucinol (DAPG), exhibited a broad-spectrum of anti-leukemic, anti-lung, and anti-breast cancer properties. The aim of the present investigation was to study the interactive potentials of DAPG with the metastatic proteins such as MMP-2, MMP-9, and NF-κB and antiapoptotic Bcl-2 family proteins such as Bcl-2, Bcl-w, and Bcl-xL through in silico interaction and in vitro studies. The in silico modeling predicted high interactions of DAPG with the metastatic proteins, especially MMP-2, MMP-9, and NF-κB with the glide score of -7.028, -6.304, and -5.231, respectively. Similarly, the DAPG had weak interactions with the antiapoptotic Bcl-2, Bcl-w, and Bcl-xL with the glide score of -4.505, -3.839, and -4.003, respectively. The interaction studies further revealed the inhibition of MMP-2, MMP-9, and NF-κB activities with the low IC50 concentration of 5.82 ± 1.6, 6.74 ± 1.2, and 10.7 ± 1.5 μM respectively, in the presence of DAPG. Similarly, DAPG inhibited the Bcl-2, Bcl-xL and Bcl-w activities with the high IC50 concentration of 29.8 ± 1.9, 85.9 ± 2.7, and 97.4 ± 1.5 μM, respectively. These results correlate with the relatively high IC50 concentration of 16.3 ± 1.76, 7.67 ± 0.78, and 10.7 ± 0.96 μM in the Bcl-2-overexpressing HL-60, K562 and Raji leukemic cells than the metastatic A549 and MDA MB-231 cancer cells with the low IC50 concentration of 0.06 ± 0.02 and 0.08 ± 0.01 μM, respectively, compared to the healthy, human embryonic kidney (HEK-293) cells with the high IC50 concentration of 54.7 ± 1.43 μM. In summary, the affinity of DAPG with proteins are in the order of MMP-2 > MMP-9 > NF-κB > Bcl-2 > Bcl-xL > Bcl-w. Results presented in this study confirmed the high interaction of DAPG with the metastatic proteins than the antiapoptotic Bcl-2 family proteins.
微生物聚酮化合物2,4-二乙酰基间苯三酚(DAPG)具有广谱的抗白血病、抗肺癌和抗乳腺癌特性。本研究的目的是通过计算机模拟相互作用和体外研究,探讨DAPG与转移蛋白如基质金属蛋白酶-2(MMP-2)、基质金属蛋白酶-9(MMP-9)和核因子-κB(NF-κB)以及抗凋亡Bcl-2家族蛋白如Bcl-2、Bcl-w和Bcl-xL的相互作用潜力。计算机模拟建模预测DAPG与转移蛋白有高度相互作用,尤其是与MMP-2、MMP-9和NF-κB,其Glide评分分别为-7.028、-6.304和-5.231。同样,DAPG与抗凋亡的Bcl-2、Bcl-w和Bcl-xL有较弱的相互作用,其Glide评分分别为-4.505、-3.839和-4.003。相互作用研究进一步揭示,在存在DAPG的情况下,MMP-2、MMP-9和NF-κB活性受到抑制,其IC50低浓度分别为5.82±1.6、6.74±1.2和10.7±1.5μM。同样,DAPG抑制Bcl-2、Bcl-xL和Bcl-w活性时,IC50高浓度分别为29.8±1.9、85.9±2.7和97.4±1.5μM。这些结果与Bcl-2过表达的HL-60、K562和Raji白血病细胞中相对较高的IC50浓度16.3±1.76、7.67±0.78和10.7±0.96μM相关,而转移的A549和MDA MB-231癌细胞的IC50低浓度分别为0.06±0.02和0.08±0.01μM,相比之下,健康的人胚肾(HEK-293)细胞的IC50高浓度为54.7±1.43μM。总之,DAPG与蛋白质的亲和力顺序为MMP-2>MMP-9>NF-κB>Bcl-2>Bcl-xL>Bcl-w。本研究结果证实,DAPG与转移蛋白的相互作用高于抗凋亡Bcl-2家族蛋白。