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尿素诱导的人钙/钙调蛋白依赖性蛋白激酶 IV 的变性:结合光谱和 MD 模拟研究。

Urea-induced denaturation of human calcium/calmodulin-dependent protein kinase IV: a combined spectroscopic and MD simulation studies.

机构信息

a Center for Interdisciplinary Research in Basic Sciences , Jamia Millia Islamia , Jamia Nagar, New Delhi 110025 , India.

b Department of Chemistry , Durban University of Technology , Durban 4000 , South Africa.

出版信息

J Biomol Struct Dyn. 2017 Feb;35(3):463-475. doi: 10.1080/07391102.2016.1150203. Epub 2016 Mar 8.

Abstract

Calcium/calmodulin-dependent protein kinase IV (CaMKIV) is a multifunctional enzyme which belongs to the Ser/Thr kinase family. CaMKIV plays important role in varieties of biological processes such as gene expression regulation, memory consolidation, bone growth, T-cell maturation, sperm motility, regulation of microtubule dynamics, cell-cycle progression, and apoptosis. To measure stability parameters, urea-induced denaturation of CaMKIV was carried out at pH 7.4 and 25°C, using three different probes, namely far-UV CD, near-UV absorption, and tryptophan fluorescence. A coincidence of normalized denaturation curves of these optical properties suggests that urea-induced denaturation is a two-state process. Analysis of these denaturation curves gave values of 4.20 ± 0.12 kcal mol, 2.95 ± 0.15 M, and 1.42 ± 0.06 kcal mol M for [Formula: see text] (Gibbs free energy change (ΔG) in the absence of urea), C (molar urea concentration ([urea]) at the midpoint of the denaturation curve), and m (=∂ΔG/∂[urea]), respectively. All these experimental observations have been fully supported by 30 ns molecular dynamics simulation studies.

摘要

钙/钙调蛋白依赖性蛋白激酶 IV(CaMKIV)是一种多功能酶,属于丝氨酸/苏氨酸激酶家族。CaMKIV 在各种生物过程中发挥重要作用,如基因表达调控、记忆巩固、骨生长、T 细胞成熟、精子活力、微管动力学调节、细胞周期进程和细胞凋亡。为了测量稳定性参数,在 pH 7.4 和 25°C 下使用三种不同的探针(远紫外 CD、近紫外吸收和色氨酸荧光)进行 CaMKIV 的尿素诱导变性。这些光学性质的归一化变性曲线的一致性表明,尿素诱导的变性是一个两态过程。对这些变性曲线的分析给出了以下值:[Formula: see text](无尿素时的 Gibbs 自由能变化(ΔG))为 4.20±0.12 kcal mol,C(变性曲线中点的摩尔尿素浓度([urea]))为 2.95±0.15 M,m(=∂ΔG/∂[urea])为 1.42±0.06 kcal mol M。所有这些实验观察结果都得到了 30 ns 分子动力学模拟研究的充分支持。

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