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钠/钙交换体NCX变构调节模型。

Model for the allosteric regulation of the Na+/Ca2+ exchanger NCX.

作者信息

Abiko Layara Akemi, Vitale Phelipe M, Favaro Denize C, Hauk Pricila, Li Da-Wei, Yuan Jiaqi, Bruschweiler-Li Lei, Salinas Roberto K, Brüschweiler Rafael

机构信息

Institute of Chemistry, University of São Paulo, São Paulo, SP, 05508-000, Brazil.

Campus Chemical Instrument Center, The Ohio State University, Columbus, Ohio, 43210.

出版信息

Proteins. 2016 May;84(5):580-90. doi: 10.1002/prot.25003. Epub 2016 Mar 11.

DOI:10.1002/prot.25003
PMID:26850381
Abstract

The Na(+) /Ca(2+) exchanger provides a major Ca(2+) extrusion pathway in excitable cells and plays a key role in the control of intracellular Ca(2+) concentrations. In Canis familiaris, Na(+) /Ca(2+) exchanger (NCX) activity is regulated by the binding of Ca(2+) to two cytosolic Ca(2+) -binding domains, CBD1 and CBD2, such that Ca(2+) -binding activates the exchanger. Despite its physiological importance, little is known about the exchanger's global structure, and the mechanism of allosteric Ca(2+) -regulation remains unclear. It was found previously that for NCX in the absence of Ca(2+) the two domains CBD1 and CBD2 of the cytosolic loop are flexibly linked, while after Ca(2+) -binding they adopt a rigid arrangement that is slightly tilted. A realistic model for the mechanism of the exchanger's allosteric regulation should not only address this property, but also it should explain the distinctive behavior of Drosophila melanogaster's sodium/calcium exchanger, CALX, for which Ca(2+) -binding to CBD1 inhibits Ca(2+) exchange. Here, NMR spin relaxation and residual dipolar couplings were used to show that Ca(2+) modulates CBD1 and CBD2 interdomain flexibility of CALX in an analogous way as for NCX. A mechanistic model for the allosteric Ca(2+) regulation of the Na(+) /Ca(2+) exchanger is proposed. In this model, the intracellular loop acts as an entropic spring whose strength is modulated by Ca(2+) -binding to CBD1 controlling ion transport across the plasma membrane.

摘要

钠/钙交换蛋白在可兴奋细胞中提供了一条主要的钙排出途径,在控制细胞内钙浓度方面发挥着关键作用。在犬类中,钠/钙交换蛋白(NCX)的活性受钙离子与两个胞质钙结合结构域CBD1和CBD2的结合调节,使得钙离子结合激活该交换蛋白。尽管其具有生理重要性,但对该交换蛋白的整体结构知之甚少,变构钙调节机制仍不清楚。先前发现,对于无钙离子状态下的NCX,胞质环的两个结构域CBD1和CBD2是灵活连接的,而在钙离子结合后,它们会采取一种略有倾斜的刚性排列。一个关于该交换蛋白变构调节机制的现实模型不仅应解决这一特性,还应解释果蝇钠/钙交换蛋白CALX的独特行为,对于CALX,钙离子与CBD1结合会抑制钙交换。在此,利用核磁共振自旋弛豫和剩余偶极耦合来表明,钙离子以与NCX类似的方式调节CALX的CBD1和CBD2结构域间的灵活性。提出了一个关于钠/钙交换蛋白变构钙调节的机制模型。在这个模型中,细胞内环充当一个熵弹簧,其强度由钙离子与CBD1的结合调节,从而控制离子跨质膜的运输。

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1
Model for the allosteric regulation of the Na+/Ca2+ exchanger NCX.钠/钙交换体NCX变构调节模型。
Proteins. 2016 May;84(5):580-90. doi: 10.1002/prot.25003. Epub 2016 Mar 11.
2
Ca2+ binding alters the interdomain flexibility between the two cytoplasmic calcium-binding domains in the Na+/Ca2+ exchanger.钙离子结合改变了钠离子/钙离子交换体中两个胞质钙离子结合域之间的结构域灵活性。
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Ca2+ regulation in the Na+/Ca2+ exchanger features a dual electrostatic switch mechanism.钠/钙交换体中的钙离子调节具有双静电开关机制。
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Structural basis for Ca2+ regulation in the Na+/Ca2+ exchanger.钠钙交换体中钙离子调节的结构基础。
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Ca2+ regulation in the Na+/Ca2+ exchanger involves two markedly different Ca2+ sensors.钠钙交换体中的钙离子调节涉及两种截然不同的钙离子传感器。
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Ca2+-dependent structural rearrangements within Na+-Ca2+ exchanger dimers.钙离子依赖的钠钙交换体二聚体的结构重排。
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Ca(2+) regulation in the Na(+)/Ca (2+) exchanger features a dual electrostatic switch mechanism.钙离子在钠离子/钙离子交换器中的调节作用具有双重静电开关机制。
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Crystal structures of progressive Ca2+ binding states of the Ca2+ sensor Ca2+ binding domain 1 (CBD1) from the CALX Na+/Ca2+ exchanger reveal incremental conformational transitions.CALX 钠钙交换器中钙传感器 Ca2+结合域 1(CBD1)的渐进性 Ca2+结合状态的晶体结构揭示了递增的构象转变。
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Molecular determinants of allosteric regulation in NCX proteins.NCX 蛋白变构调节的分子决定因素。
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Structure-Based Function and Regulation of NCX Variants: Updates and Challenges.基于结构的 NCX 变体的功能和调节:更新与挑战。
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Molecular insights on CALX-CBD12 interdomain dynamics from MD simulations, RDCs, and SAXS.基于 MD 模拟、RDC 和 SAXS 的 CALX-CBD12 结构域间动力学的分子见解。
Biophys J. 2021 Sep 7;120(17):3664-3675. doi: 10.1016/j.bpj.2021.07.022. Epub 2021 Jul 24.