Singh Hariom, Marathe Shruti, Nain Sumitra, Nema Vijay, Angadi Mansa, Bapat Shradha, Pawar Jyoti, Ghate Manisha, Sahay Seema, Gangakhedkar Raman R
Department of Molecular Biology, National AIDS Research Institute, Pune, India.
Department of Clinical Sciences, National AIDS Research Institute, Pune, India.
APMIS. 2016 May;124(5):401-5. doi: 10.1111/apm.12517. Epub 2016 Feb 8.
The allelic variations in the AIDS restriction genes have been associated with the acquisition of HIV-1 and its progression. The distribution of antiviral gene variants significantly differs between populations. Therefore, we aimed to evaluate the distribution of variant allele of 186H/R in exon4 of APOBEC3G between HIV infected individuals and healthy controls among western Indian.In the present cross-sectional study, we enrolled a total of 153 HIV-infected patients confirmed and 156 unrelated healthy individuals. Polymorphism for 186H/R in exon4 of APOBEC3G gene was genotyped by PCR-RFLP. With the frequency of 186HR heterozygous genotype of APOBEC3G was found to be 13% in healthy controls and none in HIV infected cases. The frequency of 186HH common genotype of APOBEC3G was observed higher in HIV infected individuals compared with healthy controls (100% vs 91.7%). The variant genotype 186RR in APOBEC3G was not found in both the groups. The frequency of 186R allele of APOBEC3G was found 4.16% in healthy controls and nil in HIV-infected cases. The frequency of 186H allele of APOBEC3G was found to be higher in HIV-infected cases compared with healthy controls (100% vs 95.83%). The frequency of 186R allele in exon4 of APOBEC3G was found to be 4.16% in healthy controls. This observation differs from the previous report published from North India stating the absence of 186R allele of APOBEC3G in the North Indian individuals. The variant 186H/R in exon4 of APOBEC3G was neither associated with risk of acquisition of HIV-1 nor its progression.
艾滋病限制基因中的等位基因变异与HIV-1的感染及其病情进展有关。抗病毒基因变体的分布在不同人群之间存在显著差异。因此,我们旨在评估印度西部HIV感染者和健康对照人群中APOBEC3G基因第4外显子186H/R变异等位基因的分布情况。在本横断面研究中,我们共纳入了153例确诊的HIV感染患者和156名无血缘关系的健康个体。采用PCR-RFLP方法对APOBEC3G基因第4外显子186H/R多态性进行基因分型。结果发现,APOBEC3G基因186HR杂合基因型在健康对照中的频率为13%,而在HIV感染病例中未检测到。与健康对照相比,APOBEC3G基因186HH常见基因型在HIV感染者中的频率更高(100%对91.7%)。在两组中均未发现APOBEC3G基因的186RR变异基因型。APOBEC3G基因186R等位基因在健康对照中的频率为4.16%,在HIV感染病例中为零。与健康对照相比,APOBEC3G基因186H等位基因在HIV感染病例中的频率更高(100%对95.83%)。APOBEC3G基因第4外显子186R等位基因在健康对照中的频率为4.16%。这一观察结果与之前北印度发表的报告不同,该报告称北印度个体中不存在APOBEC3G基因的186R等位基因。APOBEC3G基因第4外显子的186H/R变异与HIV-1的感染风险及其病情进展均无关。