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通过研究外显子组测序在胸主动脉瘤患者中鉴定出的临床相关变异。

Clinically relevant variants identified in thoracic aortic aneurysm patients by research exome sequencing.

作者信息

Schubert Jeffrey A, Landis Benjamin J, Shikany Amy R, Hinton Robert B, Ware Stephanie M

机构信息

Department of Molecular Genetics, Biochemistry and Microbiology, University of Cincinnati College of Medicine, Cincinnati, Ohio.

Department of Pediatrics and Medical and Molecular Genetics, Indiana University School of Medicine, Indianapolis, Indiana.

出版信息

Am J Med Genet A. 2016 May;170A(5):1288-94. doi: 10.1002/ajmg.a.37568. Epub 2016 Feb 7.

Abstract

Thoracic aortic aneurysm (TAA) is a genetically heterogeneous disease involving subclinical and progressive dilation of the thoracic aorta, which can lead to life-threatening complications such as dissection or rupture. Genetic testing is important for risk stratification and identification of at risk family members, and clinically available genetic testing panels have been expanding rapidly. However, when past testing results are normal, there is little evidence to guide decision-making about the indications and timing to pursue additional clinical genetic testing. Results from research based genetic testing can help inform this process. Here we present 10 TAA patients who have a family history of disease and who enrolled in research-based exome testing. Nine of these ten patients had previous clinical genetic testing that did not identify the cause of disease. We sought to determine the number of rare variants in 23 known TAA associated genes identified by research-based exome testing. In total, we found 10 rare variants in six patients. Likely pathogenic variants included a TGFB2 variant in one patient and a SMAD3 variant in another. These variants have been reported previously in individuals with similar phenotypes. Variants of uncertain significance of particular interest included novel variants in MYLK and MFAP5, which were identified in a third patient. In total, clinically reportable rare variants were found in 6/10 (60%) patients, with at least 2/10 (20%) patients having likely pathogenic variants identified. These data indicate that consideration of re-testing is important in TAA patients with previous negative or inconclusive results.

摘要

胸主动脉瘤(TAA)是一种具有遗传异质性的疾病,涉及胸主动脉的亚临床和进行性扩张,可导致诸如夹层或破裂等危及生命的并发症。基因检测对于风险分层和识别高危家庭成员很重要,并且临床上可用的基因检测面板一直在迅速扩展。然而,当过去的检测结果正常时,几乎没有证据可指导关于进行额外临床基因检测的适应症和时机的决策。基于研究的基因检测结果有助于为这一过程提供信息。在此,我们介绍10例有疾病家族史且参加了基于研究的外显子组检测的TAA患者。这10例患者中有9例曾进行过临床基因检测,但未确定疾病原因。我们试图确定通过基于研究的外显子组检测在23个已知的与TAA相关的基因中发现的罕见变异的数量。我们总共在6例患者中发现了10个罕见变异。可能致病的变异包括1例患者中的TGFB2变异和另1例患者中的SMAD3变异。这些变异先前已在具有相似表型的个体中报道过。特别感兴趣的意义不确定的变异包括在第3例患者中发现的MYLK和MFAP5中的新变异。总共在6/10(60%)的患者中发现了可临床报告的罕见变异,其中至少2/10(20%)的患者鉴定出了可能致病的变异。这些数据表明,对于先前检测结果为阴性或不确定的TAA患者,考虑重新检测很重要。

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