Thoppil Anu A, Choudhary Sinjan, Kishore Nand
Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India.
UM-DAE Centre for Excellence in Basic Sciences, Santacruz (E), Mumbai 400 098, India.
Biochim Biophys Acta. 2016 May;1860(5):917-929. doi: 10.1016/j.bbagen.2016.01.026. Epub 2016 Feb 13.
Isothermal titration calorimetry (ITC) has emerged as an excellent method to characterize drug-protein interactions. 5-Fluorouracil and cyclophosphamide have been used in combination for the treatment of breast carcinoma, though individually these drugs have also been useful in treating other types of cancer. A quantitative understanding of binding of these drugs with the transport protein under different conditions is essential for optimizing recognition by the protein and delivery at the target.
The values of binding constant, enthalpy, and entropy of binding have been determined by using ITC. Fluorescence and circular dichroism spectroscopies have been used to obtain further support to calorimetric observations, monitor conformational changes in the protein and establishing stoichiometry of association.
The thermodynamic parameters have enabled a quantitative understanding of the affinity of 5-fluorouracil and cyclophosphamide with bovine serum albumin. The nature of binding has been unraveled based on effect of ionic strength, tetrabutyl-ammonium bromide, and sucrose which interfere in ionic, hydrophobic, and hydrogen bonding interactions. The binding site has been identified by using site marker warfarin in combination with 5-fluorouracil and cyclophosphamide. Further, the experiments have been done to establish whether both the drugs share the same binding site, and the effect of antibiotic drug carbenecillin and anti-inflammatory drug naproxen on their association.
Tuning optimum association of drugs with the transport vehicles for effective drug delivery requires identification of the nature of interacting groups in terms of energetics of interactions. Such studies employing ITC have direct significance in rational drug design.
等温滴定量热法(ITC)已成为表征药物 - 蛋白质相互作用的一种出色方法。5-氟尿嘧啶和环磷酰胺已联合用于治疗乳腺癌,尽管这两种药物单独使用时也对治疗其他类型癌症有效。定量了解这些药物在不同条件下与转运蛋白的结合情况对于优化蛋白识别及在靶点的递送至关重要。
通过ITC测定了结合常数、结合焓和结合熵的值。利用荧光光谱和圆二色光谱来进一步支持量热观察结果,监测蛋白质的构象变化并确定结合化学计量。
热力学参数使得能够定量了解5-氟尿嘧啶和环磷酰胺与牛血清白蛋白的亲和力。基于离子强度、四丁基溴化铵和蔗糖对离子、疏水和氢键相互作用的干扰效应,揭示了结合的性质。通过将位点标记华法林与5-氟尿嘧啶和环磷酰胺联合使用来确定结合位点。此外,还进行了实验以确定这两种药物是否共享相同的结合位点,以及抗生素药物羧苄西林和抗炎药物萘普生对它们结合的影响。
为实现有效的药物递送,调整药物与转运载体的最佳结合需要从相互作用能的角度确定相互作用基团的性质。此类采用ITC的研究在合理药物设计中具有直接意义。