Marino Jacopo, von Heijne Gunnar, Beckmann Roland
Gene Center and Center for Integrated Protein Science Munich, CiPS-M, University of Munich, Germany.
Department of Biochemistry and Biophysics, Center for Biomembrane Research, Stockholm University, Sweden.
FEBS Lett. 2016 Mar;590(5):655-60. doi: 10.1002/1873-3468.12098. Epub 2016 Feb 25.
Cotranslational folding of small protein domains within the ribosome exit tunnel may be an important cellular strategy to avoid protein misfolding. However, the pathway of cotranslational folding has so far been described only for a few proteins, and therefore, it is unclear whether folding in the ribosome exit tunnel is a common feature for small protein domains. Here, we have analyzed nine small protein domains and determined at which point during translation their folding generates sufficient force on the nascent chain to release translational arrest by the SecM arrest peptide, both in vitro and in live E. coli cells. We find that all nine protein domains initiate folding while still located well within the ribosome exit tunnel.
核糖体出口通道内小蛋白质结构域的共翻译折叠可能是避免蛋白质错误折叠的一种重要细胞策略。然而,迄今为止,仅针对少数蛋白质描述了共翻译折叠途径,因此,尚不清楚核糖体出口通道中的折叠是否是小蛋白质结构域的共同特征。在这里,我们分析了九个小蛋白质结构域,并确定了在翻译过程中的哪个时刻,它们的折叠会在新生链上产生足够的力,以通过SecM抑制肽在体外和活的大肠杆菌细胞中释放翻译停滞。我们发现,所有九个蛋白质结构域在仍位于核糖体出口通道内时就开始折叠。