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Interactions of the Chemokine CCL5/RANTES with Medium-Sized Chondroitin Sulfate Ligands.趋化因子CCL5/RANTES与中等大小硫酸软骨素配体的相互作用
Structure. 2015 Jun 2;23(6):1066-77. doi: 10.1016/j.str.2015.03.024. Epub 2015 May 14.
2
Structural mechanisms underlying sequence-dependent variations in GAG affinities of decorin binding protein A, a Borrelia burgdorferi adhesin.伯氏疏螺旋体粘附素decorin结合蛋白A的GAG亲和力序列依赖性变异的结构机制。
Biochem J. 2015 May 1;467(3):439-51. doi: 10.1042/BJ20141201.
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Primary ovarian carcinomas and abdominal metastasis contain 4,6-disulfated chondroitin sulfate rich regions, which provide adhesive properties to tumour cells.原发性卵巢癌和腹部转移瘤含有富含4,6-二硫酸化硫酸软骨素的区域,这些区域赋予肿瘤细胞黏附特性。
PLoS One. 2014 Nov 5;9(11):e111806. doi: 10.1371/journal.pone.0111806. eCollection 2014.
4
Phosphoproteomic analysis of the striatum from pleiotrophin knockout and midkine knockout mice treated with cocaine reveals regulation of oxidative stress-related proteins potentially underlying cocaine-induced neurotoxicity and neurodegeneration.对接受可卡因治疗的外泌素敲除和中期因子敲除小鼠纹状体的磷酸化蛋白质组学分析揭示了潜在的与氧化应激相关的蛋白质的调节,这些蛋白质可能是可卡因诱导的神经毒性和神经退行性变的基础。
Toxicology. 2013 Dec 6;314(1):166-73. doi: 10.1016/j.tox.2013.09.014. Epub 2013 Oct 1.
5
Targeting midkine and pleiotrophin signalling pathways in addiction and neurodegenerative disorders: recent progress and perspectives.靶向成瘾和神经退行性疾病中的中期因子和多效生长因子信号通路:最新进展与展望
Br J Pharmacol. 2014 Feb;171(4):837-48. doi: 10.1111/bph.12312.
6
Differential phosphoproteome of the striatum from pleiotrophin knockout and midkine knockout mice treated with amphetamine: correlations with amphetamine-induced neurotoxicity.阿朴吗啡处理的多效蛋白和中期因子缺失型小鼠纹状体的差异磷酸化蛋白质组学:与阿朴吗啡诱导的神经毒性的相关性。
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7
Structure-function analysis of full-length midkine reveals novel residues important for heparin binding and zebrafish embryogenesis.全长中期因子的结构功能分析揭示了肝素结合和斑马鱼胚胎发生的新关键残基。
Biochem J. 2013 May 1;451(3):407-15. doi: 10.1042/BJ20121622.
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Interaction of chondroitin sulfate and dermatan sulfate from various biological sources with heparin-binding growth factors and cytokines.不同生物来源的硫酸软骨素和硫酸皮肤素与肝素结合生长因子和细胞因子的相互作用。
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Pleiotrophin regulates the retention and self-renewal of hematopoietic stem cells in the bone marrow vascular niche.pleiotrophin 调节造血干细胞在骨髓血管龛中的保留和自我更新。
Cell Rep. 2012 Oct 25;2(4):964-75. doi: 10.1016/j.celrep.2012.09.002. Epub 2012 Oct 19.
10
Highly sulfated hexasaccharide sequences isolated from chondroitin sulfate of shark fin cartilage: insights into the sugar sequences with bioactivities.从鲨鱼鳍软骨的硫酸软骨素中分离出的高度硫酸化的六糖序列:对具有生物活性的糖序列的深入了解。
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结构研究揭示了多效生长因子C末端在介导与硫酸软骨素相互作用中的重要作用。

Structural studies reveal an important role for the pleiotrophin C-terminus in mediating interactions with chondroitin sulfate.

作者信息

Ryan Eathen, Shen Di, Wang Xu

机构信息

School of Molecular Sciences, Arizona State University, Tempe, AZ, USA.

出版信息

FEBS J. 2016 Apr;283(8):1488-503. doi: 10.1111/febs.13686. Epub 2016 Mar 6.

DOI:10.1111/febs.13686
PMID:26896299
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6217956/
Abstract

UNLABELLED

Pleiotrophin (PTN) is a potent glycosaminoglycan-binding cytokine that is important in neural development, angiogenesis and tissue regeneration. Much of its activity is attributed to its interactions with the chondroitin sulfate (CS) proteoglycan, receptor type protein tyrosine phosphatase ζ (PTPRZ). However, there is little high resolution structural information on the interactions between PTN and CS, nor is it clear why the C-terminal tail of PTN is necessary for signaling through PTPRZ, even though it does not contribute to heparin binding. We determined the first structure of PTN and analyzed its interactions with CS. Our structure shows that PTN possesses large basic surfaces on both of its structured domains and also that residues in the hinge segment connecting the domains have significant contacts with the C-terminal domain. Our analysis of PTN-CS interactions showed that the C-terminal tail of PTN is essential for maintaining stable interactions with chondroitin sulfate A, the type of CS commonly found on PTPRZ. These results offer the first possible explanation of why truncated PTN missing the C-terminal tail is unable to signal through PTPRZ. NMR analysis of the interactions of PTN with CS revealed that the C-terminal domain and hinge of PTN make up the major CS-binding site in PTN, and that removal of the C-terminal tail weakened the affinity of the site for CSA but not for other high sulfation density CS.

DATABASE

Coordinates of the ensemble of ten PTN structures have been deposited in RCSB under accession number 2n6f. Chemical shifts assignments and structural constraints have been deposited in BMRB under accession number 25762.

摘要

未标记

多效生长因子(PTN)是一种强效的糖胺聚糖结合细胞因子,在神经发育、血管生成和组织再生中起重要作用。其许多活性归因于它与硫酸软骨素(CS)蛋白聚糖、受体型蛋白酪氨酸磷酸酶ζ(PTPRZ)的相互作用。然而,关于PTN与CS之间相互作用的高分辨率结构信息很少,也不清楚为什么PTN的C末端尾巴对于通过PTPRZ进行信号传导是必需的,尽管它对肝素结合没有贡献。我们确定了PTN的首个结构并分析了它与CS的相互作用。我们的结构表明,PTN在其两个结构化结构域上都具有大的碱性表面,并且连接这些结构域的铰链段中的残基与C末端结构域有显著接触。我们对PTN-CS相互作用的分析表明,PTN的C末端尾巴对于与硫酸软骨素A保持稳定相互作用至关重要,硫酸软骨素A是PTPRZ上常见的CS类型。这些结果首次给出了缺失C末端尾巴的截短型PTN无法通过PTPRZ进行信号传导的可能解释。PTN与CS相互作用的核磁共振分析表明,PTN的C末端结构域和铰链构成了PTN中主要的CS结合位点,并且去除C末端尾巴会削弱该位点对硫酸软骨素A的亲和力,但不会削弱对其他高硫酸化密度CS的亲和力。

数据库

十个PTN结构集合的坐标已存入RCSB,登录号为2n6f。化学位移归属和结构约束已存入BMRB,登录号为25762。