Zhou Xiang-da, Song Xiao, Huai Cong, Sun Hai-yan, Chen Hong-yan, Lu Da-ru
State Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai 200433, China.
Yi Chuan. 2016 Feb;38(2):163-9. doi: 10.16288/j.yczz.15-428.
The traditional Type Ⅱ restriction enzyme-based method is restricted by the purification steps, and therefore, cannot be applied to specific DNA assembly in chaotic system. To solve this problem, Thermostable Ligase Chain Reaction (TLCR) was introduced in the process of DNA assembly and capture. This technique combines the feature of thermostable DNA ligase and sequence specific oligo ligation template, "Helper", to achieve specific assembly of target fragments and exponential increase of products in multiple thermocyclings. Two plasmid construction experiments were carried out in order to test the feasibility and practical performance of TLCR. One was that, TLCR was used to specifically capture a 1.5 kb fragment into vector from an unpurified chaotic system which contained 7 different sizes of fragments. The results showed that the capturing accuracy was around 80%, which proved the feasibility and accuracy of using TLCR to specific assembly of DNA fragments in a complicated mixed system. In the other experiment, TLCR was used to capture two fragments (total length was 27 kb) from Hind Ⅲ digestion of Lambda genome into vector by order. The results also showed an accuracy of around 80%. As demonstrated in the results, TLCR can simplify the process of DNA recombination experiments and is suitable for the assembly of multiple and large DNA fragments. This technique can provide convenience to biological experiments.
传统的基于Ⅱ型限制酶的方法受纯化步骤的限制,因此不能应用于混沌系统中的特定DNA组装。为了解决这个问题,在DNA组装和捕获过程中引入了热稳定连接酶链反应(TLCR)。该技术结合了热稳定DNA连接酶和序列特异性寡核苷酸连接模板“辅助物”的特性,以实现靶片段的特异性组装和产物在多次热循环中的指数增加。为了测试TLCR的可行性和实际性能,进行了两个质粒构建实验。一个实验是,使用TLCR从包含7种不同大小片段的未纯化混沌系统中将一个1.5 kb的片段特异性捕获到载体中。结果表明,捕获准确率约为80%,这证明了使用TLCR在复杂混合系统中特异性组装DNA片段的可行性和准确性。在另一个实验中,使用TLCR按顺序从λ基因组的HindⅢ消化物中捕获两个片段(总长度为27 kb)到载体中。结果也显示准确率约为80%。如结果所示,TLCR可以简化DNA重组实验的过程,适用于多个和大片段DNA的组装。该技术可为生物学实验提供便利。