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热休克蛋白寡聚体:结构并不意味着功能。

Oligomers of Heat-Shock Proteins: Structures That Don't Imply Function.

作者信息

Jacobs William M, Knowles Tuomas P J, Frenkel Daan

机构信息

Department of Chemistry, University of Cambridge, Cambridge, United Kingdom.

出版信息

PLoS Comput Biol. 2016 Feb 29;12(2):e1004756. doi: 10.1371/journal.pcbi.1004756. eCollection 2016 Feb.

Abstract

Most proteins must remain soluble in the cytosol in order to perform their biological functions. To protect against undesired protein aggregation, living cells maintain a population of molecular chaperones that ensure the solubility of the proteome. Here we report simulations of a lattice model of interacting proteins to understand how low concentrations of passive molecular chaperones, such as small heat-shock proteins, suppress thermodynamic instabilities in protein solutions. Given fixed concentrations of chaperones and client proteins, the solubility of the proteome can be increased by tuning the chaperone-client binding strength. Surprisingly, we find that the binding strength that optimizes solubility while preventing irreversible chaperone binding also promotes the formation of weakly bound chaperone oligomers, although the presence of these oligomers does not significantly affect the thermodynamic stability of the solution. Such oligomers are commonly observed in experiments on small heat-shock proteins, but their connection to the biological function of these chaperones has remained unclear. Our simulations suggest that this clustering may not have any essential biological function, but rather emerges as a natural side-effect of optimizing the thermodynamic stability of the proteome.

摘要

大多数蛋白质必须保持可溶于细胞质溶胶中,以便发挥其生物学功能。为防止出现不期望的蛋白质聚集,活细胞维持着一群分子伴侣,以确保蛋白质组的溶解性。在此,我们报告了相互作用蛋白质晶格模型的模拟结果,以了解低浓度的被动分子伴侣(如小分子热休克蛋白)如何抑制蛋白质溶液中的热力学不稳定性。在分子伴侣和客户蛋白浓度固定的情况下,通过调节分子伴侣与客户蛋白的结合强度,可以提高蛋白质组的溶解度。令人惊讶的是,我们发现,在防止分子伴侣不可逆结合的同时优化溶解度的结合强度,也会促进弱结合分子伴侣寡聚体的形成,尽管这些寡聚体的存在对溶液的热力学稳定性没有显著影响。这种寡聚体在小分子热休克蛋白的实验中很常见,但其与这些分子伴侣生物学功能的联系尚不清楚。我们的模拟表明,这种聚集可能没有任何基本的生物学功能,而是作为优化蛋白质组热力学稳定性的自然副作用而出现。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8ee3/4771702/611fcba191ae/pcbi.1004756.g001.jpg

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