Nakabayashi Makoto, Shibata Naoki, Ishido-Nakai Emi, Kanagawa Mayumi, Iio Yota, Komori Hirofumi, Ueda Yasufumi, Nakagawa Noriko, Kuramitsu Seiki, Higuchi Yoshiki
Graduate School of Life Science, University of Hyogo, 3-2-1 Koto, Kamigori-cho, Ako-gun, Hyogo, 678-1297, Japan.
Graduate School of Natural Science and Technology, Okayama University, 3-1-1 Tsushima-naka, Kita-ku, Okayama, 700-8530, Japan.
Extremophiles. 2016 May;20(3):275-82. doi: 10.1007/s00792-016-0817-y. Epub 2016 Mar 3.
TTHA0829 from Thermus thermophilus HB8 has a molecular mass of 22,754 Da and is composed of 210 amino acid residues. The expression of TTHA0829 is remarkably elevated in the latter half of logarithmic growth phase. TTHA0829 can form either a tetrameric or dimeric structure, and main-chain folding provides an N-terminal cystathionine-β-synthase (CBS) domain and a C-terminal aspartate-kinase chorismate-mutase tyrA (ACT) domain. Both CBS and ACT are regulatory domains to which a small ligand molecule can bind. The CBS domain is found in proteins from organisms belonging to all kingdoms and is observed frequently as two or four tandem copies. This domain is considered as a small intracellular module with a regulatory function and is typically found adjacent to the active (or functional) site of several enzymes and integral membrane proteins. The ACT domain comprises four β-strands and two α-helices in a βαββαβ motif typical of intracellular small molecule binding domains that help control metabolism, solute transport and signal transduction. We discuss the possible role of TTHA0829 based on its structure and expression pattern. The results imply that TTHA0829 acts as a cell-stress sensor or a metabolite acceptor.
嗜热栖热菌HB8中的TTHA0829分子量为22,754道尔顿,由210个氨基酸残基组成。TTHA0829的表达在对数生长期后半段显著升高。TTHA0829可以形成四聚体或二聚体结构,其主链折叠形成一个N端胱硫醚-β-合酶(CBS)结构域和一个C端天冬氨酸激酶分支酸变位酶tyrA(ACT)结构域。CBS和ACT都是能结合小配体分子的调节结构域。CBS结构域存在于所有生物界生物的蛋白质中,经常以两个或四个串联拷贝的形式出现。该结构域被认为是一个具有调节功能的小细胞内模块,通常位于几种酶和整合膜蛋白的活性(或功能)位点附近。ACT结构域由四个β链和两个α螺旋组成,呈典型的细胞内小分子结合结构域的βαββαβ基序,有助于控制代谢、溶质运输和信号转导。我们根据TTHA0829的结构和表达模式讨论了其可能的作用。结果表明,TTHA0829作为一种细胞应激传感器或代谢物受体发挥作用。