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单分子在时间和空间中的3D取向:对荧光标记脂质膜的6D动态研究

Single Molecule 3D Orientation in Time and Space: A 6D Dynamic Study on Fluorescently Labeled Lipid Membranes.

作者信息

Börner Richard, Ehrlich Nicky, Hohlbein Johannes, Hübner Christian G

机构信息

Department of Chemistry, University of Zurich, Winterthurerstrasse 190, 8057, Zurich, Switzerland.

Bionanotechnology and Nanomedicine Laboratory, University of Copenhagen, Universitetsparken 5, 2100, Copenhagen, Denmark.

出版信息

J Fluoresc. 2016 May;26(3):963-75. doi: 10.1007/s10895-016-1784-5. Epub 2016 Mar 14.

DOI:10.1007/s10895-016-1784-5
PMID:26972111
Abstract

Interactions between single molecules profoundly depend on their mutual three-dimensional orientation. Recently, we demonstrated a technique that allows for orientation determination of single dipole emitters using a polarization-resolved distribution of fluorescence into several detection channels. As the method is based on the detection of single photons, it additionally allows for performing fluorescence correlation spectroscopy (FCS) as well as dynamical anisotropy measurements thereby providing access to fast orientational dynamics down to the nanosecond time scale. The 3D orientation is particularly interesting in non-isotropic environments such as lipid membranes, which are of great importance in biology. We used giant unilamellar vesicles (GUVs) labeled with fluorescent dyes down to a single molecule concentration as a model system for both, assessing the robustness of the orientation determination at different timescales and quantifying the associated errors. The vesicles provide a well-defined spherical surface, such that the use of fluorescent lipid dyes (DiO) allows to establish a a wide range of dipole orientations experimentally. To complement our experimental data, we performed Monte Carlo simulations of the rotational dynamics of dipoles incorporated into lipid membranes. Our study offers a comprehensive view on the dye orientation behavior in a lipid membrane with high spatiotemporal resolution representing a six-dimensional fluorescence detection approach.

摘要

单分子之间的相互作用在很大程度上取决于它们相互的三维取向。最近,我们展示了一种技术,该技术能够利用荧光在多个检测通道中的偏振分辨分布来确定单个偶极发射体的取向。由于该方法基于单光子检测,它还允许进行荧光相关光谱(FCS)以及动态各向异性测量,从而能够获取直至纳秒时间尺度的快速取向动力学信息。在诸如脂质膜等非各向同性环境中,三维取向尤其令人关注,而脂质膜在生物学中具有重要意义。我们使用标记有荧光染料直至单分子浓度的巨型单层囊泡(GUV)作为模型系统,来评估不同时间尺度下取向确定的稳健性并量化相关误差。这些囊泡提供了一个明确界定的球形表面,使得使用荧光脂质染料(DiO)能够在实验中建立广泛的偶极取向范围。为补充我们的实验数据,我们对掺入脂质膜中的偶极的旋转动力学进行了蒙特卡罗模拟。我们的研究以高时空分辨率提供了关于脂质膜中染料取向行为的全面视图,代表了一种六维荧光检测方法。

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Single Molecule 3D Orientation in Time and Space: A 6D Dynamic Study on Fluorescently Labeled Lipid Membranes.单分子在时间和空间中的3D取向:对荧光标记脂质膜的6D动态研究
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本文引用的文献

1
Ultimate use of two-photon fluorescence microscopy to map orientational behavior of fluorophores.利用双光子荧光显微镜对荧光团的取向行为进行定位。
Biophys J. 2014 Jun 3;106(11):2330-9. doi: 10.1016/j.bpj.2014.04.011.
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Accurate determination of the orientational distribution of a fluorescent molecule in a phospholipid membrane.准确测定磷脂膜中荧光分子的取向分布。
J Phys Chem B. 2014 Jan 30;118(4):855-63. doi: 10.1021/jp4067026. Epub 2013 Nov 27.
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Molecular rheometry: direct determination of viscosity in Lo and Ld lipid phases via fluorescence lifetime imaging.
基于相机的单分子荧光实验模拟。
PLoS One. 2018 Apr 13;13(4):e0195277. doi: 10.1371/journal.pone.0195277. eCollection 2018.
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Enhanced DNA imaging using super-resolution microscopy and simultaneous single-molecule orientation measurements.使用超分辨率显微镜和同步单分子取向测量增强DNA成像。
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分子流变学:通过荧光寿命成像直接测定 Lo 和 Ld 脂质相中的粘度。
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Single-molecule orientation measurements with a quadrated pupil.利用四角光瞳进行单分子取向测量。
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Simultaneous, accurate measurement of the 3D position and orientation of single molecules.同时精确测量单个分子的 3D 位置和方向。
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Efficient simultaneous fluorescence orientation, spectrum, and lifetime detection for single molecule dynamics.高效的单分子动力学荧光取向、光谱和寿命同时检测。
J Chem Phys. 2012 Oct 28;137(16):164202. doi: 10.1063/1.4759108.
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Fluorescence microscopy for simultaneous observation of 3D orientation and movement and its application to quantum rod-tagged myosin V.荧光显微镜用于同时观察 3D 取向和运动及其在量子点标记肌球蛋白 V 中的应用。
Proc Natl Acad Sci U S A. 2012 Apr 3;109(14):5294-8. doi: 10.1073/pnas.1118472109. Epub 2012 Mar 19.
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Fluorescence anisotropy based single liposome assay to measure molecule-membrane interactions.基于荧光各向异性的单个脂质体检测法来测量分子-膜相互作用。
Anal Chem. 2011 Nov 1;83(21):8169-76. doi: 10.1021/ac2017234. Epub 2011 Oct 3.
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Spectral diffusion of single molecules in a hierarchical energy landscape.分子在层次化能量景观中的光谱扩散。
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Surfing on a new wave of single-molecule fluorescence methods.冲浪于单分子荧光方法的新浪潮之上。
Phys Biol. 2010 Aug 4;7(3):031001. doi: 10.1088/1478-3975/7/3/031001.