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用于东非硬蜱物种全面索引的基质辅助激光解吸/电离飞行时间质谱分析

Matrix-assisted laser desorption/ionization time of flight mass spectrometry for comprehensive indexing of East African ixodid tick species.

作者信息

Rothen Julian, Githaka Naftaly, Kanduma Esther G, Olds Cassandra, Pflüger Valentin, Mwaura Stephen, Bishop Richard P, Daubenberger Claudia

机构信息

Department of Medical Parasitology and Infection Biology, Clinical Immunology Unit, Swiss Tropical and Public Health Institute (Swiss TPH), Socinstr. 57, CH 4002, Basel, Switzerland.

University of Basel, Petersplatz 1, CH 4003, Basel, Switzerland.

出版信息

Parasit Vectors. 2016 Mar 15;9:151. doi: 10.1186/s13071-016-1424-6.

Abstract

BACKGROUND

The tick population of Africa includes several important genera belonging to the family Ixodidae. Many of these ticks are vectors of protozoan and rickettsial pathogens including Theileria parva that causes East Coast fever, a debilitating cattle disease endemic to eastern, central and southern Africa. Effective surveillance of tick-borne pathogens depends on accurate identification and mapping of their tick vectors. A simple and reproducible technique for rapid and reliable differentiation of large numbers of closely related field-collected ticks, which are often difficult and tedious to discriminate purely by morphology, will be an essential component of this strategy. Matrix-assisted laser desorption/ionization time of flight mass spectrometry (MALDI-TOF MS) is increasingly becoming a useful tool in arthropod identification and has the potential to overcome the limitations of classical morphology-based species identification. In this study, we applied MALDI-TOF MS to a collection of laboratory and field ticks found in Eastern Africa. The objective was to determine the utility of this proteomic tool for reliable species identification of closely related afrotropical ticks.

METHODS

A total of 398 ixodid ticks from laboratory maintained colonies, extracted from the hides of animals or systematically collected from vegetation in Kenya, Sudan and Zimbabwe were analyzed in the present investigation. The cytochrome c oxidase I (COI) genes from 33 specimens were sequenced to confirm the tentatively assigned specimen taxa identity on the basis of morphological analyses. Subsequently, the legs of ticks were homogenized and analyzed by MALDI-TOF MS. A collection of reference mass spectra, based on the mass profiles of four individual ticks per species, was developed and deposited in the spectral database SARAMIS™. The ability of these superspectra (SSp.) to identify and reliably validate a set of ticks was demonstrated using the remaining individual 333 ticks.

RESULTS

Ultimately, ten different tick species within the genera Amblyomma, Hyalomma, Rhipicephalus and Rhipicephalus (Boophilus) based on molecular COI typing and morphology were included into the study analysis. The robustness of the 12 distinct SSp. developed here proved to be very high, with 319 out of 333 ticks used for validation identified correctly at species level. Moreover, these novel SSp. allowed for diagnostic specificity of 99.7 %. The failure of species identification for 14 ticks was directly linked to low quality mass spectra, most likely due to poor specimen quality that was received in the laboratory before sample preparation.

CONCLUSIONS

Our results are consistent with earlier studies demonstrating the potential of MALDI-TOF MS as a reliable tool for differentiating ticks originating from the field, especially females that are difficult to identify after blood feeding. This work provides further evidence of the utility of MALDI-TOF MS to identify morphologically and genetically highly similar tick species and indicates the potential of this tool for large-scale monitoring of tick populations, species distributions and host preferences.

摘要

背景

非洲的蜱虫种群包括硬蜱科的几个重要属。其中许多蜱虫是原生动物和立克次氏体病原体的传播媒介,包括导致东海岸热的小泰勒虫,这是一种在非洲东部、中部和南部流行的使牛衰弱的疾病。对蜱传病原体的有效监测取决于对其蜱虫传播媒介的准确识别和绘图。一种简单且可重复的技术,用于快速可靠地区分大量密切相关的野外采集的蜱虫,这些蜱虫仅通过形态学进行区分通常很困难且繁琐,将是该策略的重要组成部分。基质辅助激光解吸/电离飞行时间质谱(MALDI-TOF MS)越来越成为节肢动物鉴定中的一种有用工具,并且有潜力克服基于经典形态学的物种鉴定的局限性。在本研究中,我们将MALDI-TOF MS应用于东非发现的实验室和野外蜱虫样本。目的是确定这种蛋白质组学工具在可靠鉴定密切相关的非洲蜱虫物种方面的效用。

方法

本研究分析了总共398只来自实验室饲养群体、从动物皮上采集或在肯尼亚、苏丹和津巴布韦从植被中系统收集的硬蜱。对33个样本的细胞色素c氧化酶I(COI)基因进行测序,以根据形态学分析确认初步确定的样本分类单元身份。随后,将蜱虫腿部匀浆并通过MALDI-TOF MS进行分析。基于每个物种四个个体蜱虫的质量谱,开发了一组参考质谱,并保存在光谱数据库SARAMIS™中。使用其余333个个体蜱虫证明了这些超光谱(SSp.)识别和可靠验证一组蜱虫的能力。

结果

最终,基于分子COI分型和形态学,研究分析纳入了硬蜱属、璃眼蜱属、扇头蜱属和牛蜱属(微小牛蜱)中的10种不同蜱虫物种。在此开发的12种不同超光谱的稳健性证明非常高,用于验证的333只蜱虫中有319只在物种水平上被正确识别。此外,这些新型超光谱的诊断特异性为99.7%。14只蜱虫物种鉴定失败直接与低质量质谱相关,很可能是由于在实验室样本制备前收到的样本质量差。

结论

我们的结果与早期研究一致,证明了MALDI-TOF MS作为区分野外蜱虫,特别是吸血后难以鉴定的雌性蜱虫的可靠工具具有潜力。这项工作进一步证明了MALDI-TOF MS在鉴定形态和遗传上高度相似的蜱虫物种方面的效用,并表明该工具在大规模监测蜱虫种群、物种分布和宿主偏好方面的潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31b3/4792108/fb01daf0ba05/13071_2016_1424_Fig1_HTML.jpg

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