Hu Yun-Fei, Gao Xiao-Chen, Xu Tian-Qi, Dun Zhao, Yu Xing-Long
College of Veterinary Medicine, Hunan Agricultural University, Changsha, Hunan Province 410128, P.R. China.
Comb Chem High Throughput Screen. 2016;19(4):283-9. doi: 10.2174/1386207319666160316122106.
A random 12-peptide library was screened against Erysipelothrix rhusiopthiae and porcine circovirus 2 recombinant Cap protein and the selected peptides were used for detecting the corresponding pathogens quickly and effectively. To our surprise, seven peptides, P1 (WHWNAP WWNGVY), P2 (FHWTWQFPYTST), P3 (GAMHLPWHMGTL), P4 (HWNIWWQHHPSP), P5 (HFFKWHTRTNDQ), P6 (HFFRWHPSAHLG) and P7 (HFAYWWNGVRGP) with the characteristics of polystyrene plate (PS) binding target-unrelated peptides (TUPs), were selected from the library. It has been found that P2 and P4 shared common motif of plastic binding peptide, moreover, P2, P3, P5 and P7 have been isolated repeatedly in other research groups using different targets. Then, the seven peptide phage clones were identified as the PS binding TUP phages by phage-ELISA and elution titration, particularly, P1 and P2 showed strong PS binding affinity which can not be inhibited by usual blocking buffers. In addition, all of the phages were not propagation-related TUP, but P3 showed the similar propagation rate with M13KE (vector phage). We also found that the seven PS-TUPs are rich in W, H, F, P and G, particularly, both W and H are contained in all PS-TUPs. It deduced that they may play a potential role in peptide binding to plastic. Although it is difficult to eliminate the TUP phages in phage display completely, these PS-TUPs can be used to exclude the false positive peptides rapidly and effectively and help us to obtain truly interesting peptides more accurately.
针对猪丹毒杆菌和猪圆环病毒2重组Cap蛋白筛选了一个随机12肽文库,所筛选出的肽用于快速有效地检测相应病原体。令我们惊讶的是,从文库中筛选出了7个具有聚苯乙烯板(PS)结合非靶标相关肽(TUP)特征的肽,即P1(WHWNAP WWNGVY)、P2(FHWTWQFPYTST)、P3(GAMHLPWHMGTL)、P4(HWNIWWQHHPSP)、P5(HFFKWHTRTNDQ)、P6(HFFRWHPSAHLG)和P7(HFAYWWNGVRGP)。已发现P2和P4具有塑料结合肽的共同基序,此外,P2、P3、P5和P7在其他研究组使用不同靶标的研究中被反复分离出来。然后,通过噬菌体酶联免疫吸附测定和洗脱滴定法将这7个肽噬菌体克隆鉴定为PS结合TUP噬菌体,特别是P1和P2表现出很强的PS结合亲和力,且不能被常用的封闭缓冲液抑制。此外,所有噬菌体均与增殖无关TUP,但P3的增殖速率与M13KE(载体噬菌体)相似。我们还发现这7个PS-TUP富含W、H、F、P和G,特别是所有PS-TUP中都含有W和H。由此推断它们可能在肽与塑料的结合中发挥潜在作用。虽然很难在噬菌体展示中完全消除TUP噬菌体,但这些PS-TUP可用于快速有效地排除假阳性肽,并帮助我们更准确地获得真正感兴趣的肽。