University College London, London, UK.
Hospital Clinic-Institut d'Investigacions Biomèdiques August Pi i Sunyer, Barcelona, Spain.
Arthritis Rheumatol. 2016 Aug;68(8):2044-9. doi: 10.1002/art.39683.
To investigate the molecular cause of persistent fevers in a patient returning from working overseas, in whom investigations for tropical diseases yielded negative results.
DNA was extracted from the patient's whole blood, leukocyte subpopulations, saliva, hair root, and sperm. The TNFRSF1A gene was analyzed by polymerase chain reaction (PCR), allele-specific PCR, Sanger sequencing, and next-generation sequencing. In silico molecular modeling was performed to predict the structural and functional consequences of the tumor necrosis factor receptor (TNFR) type I protein mutation in the extracellular domain.
Sanger sequencing corroborated by allele-specific PCR detected a novel in-frame deletion of 24 nucleotides (c.255_278del) in the TNFRSF1A gene, and this was subsequently confirmed using next-generation sequencing methods (targeted sequencing and amplicon-based deep sequencing). Results of amplicon-based deep sequencing revealed variable frequency of the mutant allele among different cell lines, including sperm, thus supporting the presence of gonosomal TNFRSF1A mosaicism. The patient had a complete response to treatment with interleukin-1 (IL-1) blockade, with resolution of symptoms and normalization of acute-phase protein levels.
We describe the first case of gonosomal TNFRSF1A mosaicism in a patient with TNFR-associated periodic syndrome (TRAPS), which was attributable to a novel, somatic 24-nucleotide in-frame deletion. The clinical picture in this patient, including the complete response to IL-1 blockade, was typical of that found in TRAPS. This case adds TRAPS to the list of dominantly inherited autoinflammatory diseases reported to be caused by somatic (or postzygotic) mutation.
调查一名从海外工作回国后持续发热患者的分子病因,该患者的热带病检查结果为阴性。
从患者的全血、白细胞亚群、唾液、发根和精子中提取 DNA。通过聚合酶链反应(PCR)、等位基因特异性 PCR、Sanger 测序和下一代测序分析 TNFRSF1A 基因。进行计算机分子建模以预测肿瘤坏死因子受体(TNFR)I 型蛋白外显子突变的结构和功能后果。
Sanger 测序通过等位基因特异性 PCR 证实 TNFRSF1A 基因中存在 24 个核苷酸的新型框内缺失(c.255_278del),随后使用下一代测序方法(靶向测序和基于扩增子的深度测序)进行了确认。基于扩增子的深度测序结果显示,不同细胞系(包括精子)中突变等位基因的频率不同,这支持存在性染色体 TNFRSF1A 嵌合体。该患者对白细胞介素 1(IL-1)阻断治疗有完全反应,症状缓解,急性期蛋白水平正常化。
我们描述了首例 TNFRSF1A 性染色体嵌合体患者的病例,该患者患有 TNFR 相关周期性综合征(TRAPS),这归因于一种新的、体细胞 24 个核苷酸的框内缺失。该患者的临床表现,包括对 IL-1 阻断的完全反应,与 TRAPS 相符。该病例将 TRAPS 列入由体细胞(或合子后)突变引起的显性遗传性自身炎症性疾病。