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海枣种子的驯化综合征:迈向野生海枣种群的鉴定

The Domestication Syndrome in Phoenix dactylifera Seeds: Toward the Identification of Wild Date Palm Populations.

作者信息

Gros-Balthazard Muriel, Newton Claire, Ivorra Sarah, Pierre Marie-Hélène, Pintaud Jean-Christophe, Terral Jean-Frédéric

机构信息

Institut des Sciences de l'Evolution, Université - Montpellier, UMR 5554 CNRS / Université de Montpellier / IRD / EPHE, CC065, Equipe Dynamique de la Biodiversité, Anthropo-écologie, Place Eugène Bataillon, 34095, Montpellier Cedex 5, France.

UMR DIADE, équipe DYNADIV, Institut de Recherche pour le Développement, 911 avenue Agropolis, 34394, Montpellier cedex 5, France.

出版信息

PLoS One. 2016 Mar 24;11(3):e0152394. doi: 10.1371/journal.pone.0152394. eCollection 2016.

Abstract

Investigating crop origins is a priority to understand the evolution of plants under domestication, develop strategies for conservation and valorization of agrobiodiversity and acquire fundamental knowledge for cultivar improvement. The date palm (Phoenix dactylifera L.) belongs to the genus Phoenix, which comprises 14 species morphologically very close, sometimes hardly distinguishable. It has been cultivated for millennia in the Middle East and in North Africa and constitutes the keystone of oasis agriculture. Yet, its origins remain poorly understood as no wild populations are identified. Uncultivated populations have been described but they might represent feral, i.e. formerly cultivated, abandoned forms rather than truly wild populations. In this context, this study based on morphometrics applied to 1625 Phoenix seeds aims to (1) differentiate Phoenix species and (2) depict the domestication syndrome observed in cultivated date palm seeds using other Phoenix species as a "wild" reference. This will help discriminate truly wild from feral forms, thus providing new insights into the evolutionary history of this species. Seed size was evaluated using four parameters: length, width, thickness and dorsal view surface. Seed shape was quantified using outline analyses based on the Elliptic Fourier Transform method. The size and shape of seeds allowed an accurate differentiation of Phoenix species. The cultivated date palm shows distinctive size and shape features, compared to other Phoenix species: seeds are longer and elongated. This morphological shift may be interpreted as a domestication syndrome, resulting from the long-term history of cultivation, selection and human-mediated dispersion. Based on seed attributes, some uncultivated date palms from Oman may be identified as wild. This opens new prospects regarding the possible existence and characterization of relict wild populations and consequently for the understanding of the date palm origins. Finally, we here describe a pipeline for the identification of the domestication syndrome in seeds that could be used in other crops.

摘要

研究作物起源是了解驯化植物进化、制定农业生物多样性保护和增值策略以及获取品种改良基础知识的首要任务。海枣(Phoenix dactylifera L.)属于海枣属,该属包含14个形态非常相近、有时几乎难以区分的物种。它在中东和北非已经种植了数千年,是绿洲农业的基石。然而,由于尚未发现野生种群,其起源仍知之甚少。已描述了未驯化种群,但它们可能代表野生的,即以前种植、后被遗弃的类型,而非真正的野生种群。在此背景下,本研究基于对1625颗海枣属种子进行的形态测量,旨在(1)区分海枣属物种,以及(2)以其他海枣属物种作为“野生”参照,描绘栽培海枣种子中观察到的驯化综合征。这将有助于区分真正的野生类型和野生类型,从而为该物种的进化历史提供新的见解。使用四个参数评估种子大小:长度、宽度、厚度和背视图表面积。基于椭圆傅里叶变换方法,通过轮廓分析对种子形状进行量化。种子的大小和形状能够准确区分海枣属物种。与其他海枣属物种相比,栽培海枣表现出独特的大小和形状特征:种子更长且呈细长形。这种形态变化可被解释为驯化综合征, 这是长期栽培、选择和人类介导传播的结果。基于种子特征,阿曼的一些未驯化海枣可能被鉴定为野生的。这为残余野生种群的可能存在和特征描述以及因此对于理解海枣起源开辟了新的前景。最后,我们在此描述了一种用于鉴定种子驯化综合征的流程,该流程可用于其他作物。

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